PVAR5_1235 (Byssochlamys spectabilis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PVAR5_1235 T382456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bcin05g07400
M02571_2.00 		Botrytis cinerea
NNNCGGNN
NNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8348 		0.541 0.778
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GAD92642 Zinc cluster 36 75

Links

Other Zinc cluster family TFs
Other Byssochlamys spectabilis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I
LPERR10G04210 Leersia perrieri LPERR10G04210 I
OB01G44150 Oryza brachyantha OB01G44150 I
OBART01G35350 Oryza barthii OBART01G35350 I
OMERI01G32480 Oryza meridionalis OMERI01G32480 I
OMERI01G32490 Oryza meridionalis OMERI01G32490 I
ONIVA01G40370 Oryza nivara ONIVA01G40370 I
OPUNC01G34280 Oryza punctata OPUNC01G34280 I
ORGLA01G0291900 Oryza glaberrima ORGLA01G0291900 I
ORUFI01G38670 Oryza rufipogon ORUFI01G38670 I
Sb08g002520 Sorghum bicolor Sb08g002520 I
BGIOSGA004704 Oryza indica BGIOSGA004704 I
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I
TRAES3BF081400030CFD_g Triticum aestivum TRAES3BF081400030CFD_g I
TRIUR3_34396 Triticum urartu TRIUR3_34396 I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I
MDP0000460139 Malus domestica MDP0000460139 I
MDP0000828055 Malus domestica MDP0000828055 I
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I
GRMZM2G005207 Zea mays GRMZM2G005207 I
LPERR01G30490 Leersia perrieri LPERR01G30490 I
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I
F775_31341 Aegilops tauschii F775_31341 I
Si039519m.g Setaria italica Si039519m.g N
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N
F775_02926 Aegilops tauschii F775_02926 N
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N
F775_03183 Aegilops tauschii F775_03183 N
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N
Si010813m.g Setaria italica Si010813m.g N
F775_04954 Aegilops tauschii F775_04954 N
Sb03g038190 Sorghum bicolor Sb03g038190 N
Sb01g036870 Sorghum bicolor Sb01g036870 N
OS03G0321700 Oryza sativa OS03G0321700 N
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N
TRIUR3_06231 Triticum urartu TRIUR3_06231 N
TRIUR3_16097 Triticum urartu TRIUR3_16097 N
TRIUR3_22129 Triticum urartu TRIUR3_22129 N
BRADI2G53500 Brachypodium distachyon BRADI2G53500 N
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N
BGIOSGA036760 Oryza indica BGIOSGA036760 N
BGIOSGA012525 Oryza indica BGIOSGA012525 N
BGIOSGA012523 Oryza indica BGIOSGA012523 N
Pavir.Ca00085 Panicum virgatum Pavir.Ca00085 N
Pavir.Ea03256 Panicum virgatum Pavir.Ea03256 N
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N
Pavir.J20374 Panicum virgatum Pavir.J20374 N
BGIOSGA000583 Oryza indica BGIOSGA000583 N
GRMZM2G029282 Zea mays GRMZM2G029282 N
MLOC_34506 Hordeum vulgare MLOC_34506 N
MLOC_3853 Hordeum vulgare MLOC_3853 N
MLOC_57764 Hordeum vulgare MLOC_57764 N
OB03G25300 Oryza brachyantha OB03G25300 N
OBART01G35360 Oryza barthii OBART01G35360 N
OBART03G15470 Oryza barthii OBART03G15470 N
OBART05G20320 Oryza barthii OBART05G20320 N
OBART12G00800 Oryza barthii OBART12G00800 N
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N
OLONG_001744 Oryza longistaminata OLONG_001744 N
OLONG_028722 Oryza longistaminata OLONG_028722 N
GRMZM2G030272 Zea mays GRMZM2G030272 N
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N
OMERI01G32500 Oryza meridionalis OMERI01G32500 N
OMERI12G00120 Oryza meridionalis OMERI12G00120 N
ONIVA01G40380 Oryza nivara ONIVA01G40380 N
ONIVA03G16490 Oryza nivara ONIVA03G16490 N
ONIVA05G21450 Oryza nivara ONIVA05G21450 N
ONIVA12G00800 Oryza nivara ONIVA12G00800 N
OPUNC01G34270 Oryza punctata OPUNC01G34270 N
OPUNC01G34290 Oryza punctata OPUNC01G34290 N
OPUNC03G15030 Oryza punctata OPUNC03G15030 N
F775_31089 Aegilops tauschii F775_31089 N
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N
ORGLA05G0177300 Oryza glaberrima ORGLA05G0177300 N
LPERR03G13630 Leersia perrieri LPERR03G13630 N
F775_23296 Aegilops tauschii F775_23296 N