CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRIVIDRAFT_127080
(
Trichoderma virens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIVIDRAFT_127080
T385599_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK21816
Zinc cluster
12
50
RGCLTCRQRKKKCDQGLPICGHCSRLNLVCKHEKPRQLS
Links
Other
Zinc cluster
family TFs
Other
Trichoderma virens
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA007250
Oryza indica
BGIOSGA007250
N
BRADI3G01487
Brachypodium distachyon
BRADI3G01487
N
OBART02G01180
Oryza barthii
OBART02G01180
N
OGLUM02G01050
Oryza glumaepatula
OGLUM02G01050
N
OLONG_000270
Oryza longistaminata
OLONG_000270
N
OMERI02G00590
Oryza meridionalis
OMERI02G00590
N
ONIVA02G01060
Oryza nivara
ONIVA02G01060
N
OPUNC02G00620
Oryza punctata
OPUNC02G00620
N
ORUFI02G01170
Oryza rufipogon
ORUFI02G01170
N
Si020193m.g
Setaria italica
Si020193m.g
N