VDAG_01994 (Verticillium dahliae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDAG_01994 T387283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03417
M01422_2.00 		Neurospora crassa
NNTCGGNNNH
DNNNCCGANN		 PBM
Lambert et al.(2019)
pTH8926 		0.600 0.750
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY19978 Zinc cluster 33 70

Links

Other Zinc cluster family TFs
Other Verticillium dahliae TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAR015290 Strigamia maritima SMAR015290 N
Sakowv30043999m.g Saccoglossus kowalevskii Sakowv30043999m.g N
estExt_fgenesh2_pg.C_1230031 Branchiostoma floridae estExt_fgenesh2_pg.C_1230031 N
Tal_R013237 Tyto alba Tal_R013237 N
Gfo_R014039 Geospiza fortis Gfo_R014039 N
Brh_R012356 Buceros rhinoceros Brh_R012356 N
Alligator_sinensis_CCG014285.1 Alligator sinensis Alligator_sinensis_CCG014285.1 N
Afo_R009911 Aptenodytes forsteri Afo_R009911 N
Aan_R003320 Calypte anna Aan_R003320 N
SPU_021123 Strongylocentrotus purpuratus SPU_021123 N
CapteG161824 Capitella teleta CapteG161824 N
ENSTGUG00000003474 Taeniopygia guttata ENSTGUG00000003474 N
L3MBTL1 Meleagris gallopavo ENSMGAG00000000827 N
L3MBTL1 Loxodonta africana ENSLAFG00000012575 N
ENSLACG00000003590 Latimeria chalumnae ENSLACG00000003590 N
ENSGALG00000000983 Gallus gallus ENSGALG00000000983 N
ENSFALG00000012779 Ficedula albicollis ENSFALG00000012779 N
L3MBTL1 Cavia porcellus ENSCPOG00000008941 N
ENSAPLG00000014035 Anas platyrhynchos ENSAPLG00000014035 N
CGI_10026935 Crassostrea gigas CGI_10026935 N