CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04603
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_04603
T387508_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY18494
Zinc cluster
15
51
LACTECVRRKIRCSKSIPCDGCVRQNKASLCRREPVA
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_04603
Verticillium albo atrum
VDBG_04603
N
0.683
FFUJ_12640
Fusarium fujikuroi
FFUJ_12640
N
0.579
FOXG_14518
Fusarium oxysporum
FOXG_14518
N
0.579
FVEG_13362
Fusarium verticillioides
FVEG_13362
N
0.579
NechaG85294
Fusarium solani
NechaG85294
N
0.572
VDAG_04153
Verticillium dahliae
VDAG_04153
N
0.683
fgenesh1_pg.sca_43_chr10_1_0000008
Nectria haematococca
fgenesh1_pg.sca_43_chr10_1_0000008
N
0.572