CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_20199
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_20199
T389591_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05620
M02579_2.00
Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN
PBM
Weirauch et al.(2014)
pTH8594
0.558
0.850
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_20199
Zinc cluster
108
151
IACRYCRRRKIRCSGFEATEDGRCSNCMRFNQDCIFTPVSAQTQ
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KLTH0F07854g
Lachancea thermotolerans
KLTH0F07854g
I
0.000
ZBAI_09613
Zygosaccharomyces bailii
ZBAI_09613
I
0.000
KLTH0F07854g
Kluyveromyces thermotolerans
KLTH0F07854g
I
0.000
Kwal_3122
Kluyveromyces waltii
Kwal_3122
I
0.000
ZBAI_01680
Zygosaccharomyces bailii
ZBAI_01680
N
0.000
ZYRO0A09350g
Zygosaccharomyces rouxii
ZYRO0A09350g
N
0.000
fgenesh1_pm.00162_#_45
Aspergillus carbonarius
fgenesh1_pm.00162_#_45
N
0.000