CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_20387
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_20387
T389593_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.562
0.649
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_20387
Zinc cluster
39
75
TGCLTCRERHLKCDETKPTCNNCLKSQRECNWGKKLN
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_19355
Bipolaris maydis
COCC4DRAFT_19355
I
0.000
COCCADRAFT_32122
Bipolaris zeicola
COCCADRAFT_32122
I
0.000
COCMIDRAFT_24418
Bipolaris oryzae
COCMIDRAFT_24418
I
0.000
COCSADRAFT_306311
Bipolaris sorokiniana
COCSADRAFT_306311
I
0.000
COCVIDRAFT_12188
Bipolaris victoriae
COCVIDRAFT_12188
I
0.000
LEMA_P120870.1
Leptosphaeria maculans
LEMA_P120870.1
I
0.000
PTRG_07169
Pyrenophora triticirepentis
PTRG_07169
I
0.000
PTT_16310
Pyrenophora teres
PTT_16310
I
0.000
W97_02535
Coniosporium apollinis
W97_02535
I
0.000
estExt_fgenesh1_pg.C_40169
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_40169
I
0.000
HMPREF1120_03966
Exophiala dermatitidis
HMPREF1120_03966
N
0.000
SETTUDRAFT_166718
Setosphaeria turcica
SETTUDRAFT_166718
N
0.000