CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_chr_6.10108
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_chr_6.10108
T389634_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_6.10108
Zinc cluster
18
58
RACVFCHEKHLQCSNERPCKNCVKRGLAHECRDVIRKRAKY
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLUG_04089
Candida lusitaniae
CLUG_04089
N
0.584
CPAG_00713
Candida parapsilosis
CPAG_00713
N
0.597
CANTEDRAFT_111458
Candida tenuis
CANTEDRAFT_111458
N
0.558
CaO19.11930
Candida albicans
CaO19.11930
N
0.639
CaO19.4450
Candida albicans
CaO19.4450
N
0.639
CD36_06700
Candida dubliniensis
CD36_06700
N
0.639
CLUG_04089
Clavispora lusitaniae
CLUG_04089
N
0.584
CORT_0A07360
Candida orthopsilosis
CORT_0A07360
N
0.597
CTRG_03956
Candida tropicalis
CTRG_03956
N
0.622
DEHA2F26774g
Debaryomyces hansenii
DEHA2F26774g
N
0.584
G210_4155
Candida maltosa
G210_4155
N
0.669
GNLVRS01_PISO0M07624g
Millerozyma farinosa
GNLVRS01_PISO0M07624g
N
0.654
GNLVRS01_PISO0N07779g
Millerozyma farinosa
GNLVRS01_PISO0N07779g
N
0.654
LELG_00882
Lodderomyces elongisporus
LELG_00882
N
0.567
PICST_68007
Scheffersomyces stipitis
PICST_68007
N
0.683
SPAPADRAFT_53489
Spathaspora passalidarum
SPAPADRAFT_53489
N
0.567