CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_pm.C_50537
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh3_pm.C_50537
T389722_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00017
M02582_2.00
Neurospora crassa
NDCGBNHNNN
NNNDNVCGHN
PBM
Weirauch et al.(2014)
pTH8351
0.683
1.000
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.553
0.474
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_pm.C_50537
Zinc cluster
51
88
TGCLTCKIRKVKCDEAKPFCVRCTKTGRRCDGYLDAKT
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy