CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1.C_150162
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_150162
T389806_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU10258
M02631_2.00
Neurospora crassa
NNHCGGVN
NBCCGDNN
PBM
Weirauch et al.(2014)
pTH8978
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_150162
Zinc cluster
14
53
GACVRCRKGKTKCVYENGRAPCKNCAKGMHECYLPSESMA
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU11295
Neurospora crassa
NCU11295
D
SMAC_01078
Sordaria macrospora
SMAC_01078
I
scaffold_3-snap.405.1
Neurospora discreta
scaffold_3-snap.405.1
I