CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_sca_26_chr2_2_00249
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_sca_26_chr2_2_00249
T389845_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_sca_26_chr2_2_00249
Zinc cluster
19
54
RGCYQCSRRRIDCDRQEPTCGKCASKGITCSGLGLR
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADAFLAG00013278
Aspergillus flavus
CADAFLAG00013278
N
0.557
EURHEDRAFT_528826
Aspergillus ruber
EURHEDRAFT_528826
N
0.573
FGRRES_15944
Fusarium graminearum
FGRRES_15944
N
0.587
FOXG_03806
Fusarium oxysporum
FOXG_03806
N
0.612
FPSE_00593
Fusarium pseudograminearum
FPSE_00593
N
0.587
FVEG_12050
Fusarium verticillioides
FVEG_12050
N
0.612
NechaG58708
Fusarium solani
NechaG58708
N
0.683
PMAA_064330
Talaromyces marneffei
PMAA_064330
N
0.577
PMAA_064330
Penicillium marneffei
PMAA_064330
N
0.577