CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_chr_4000614
(
Mycosphaerella graminicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.C_chr_4000614
T390015_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_4000614
Zinc cluster
62
102
RACETCHARKVRCDAASLGVPCTNCVAFSIECKIPAPKRKK
Links
Other
Zinc cluster
family TFs
Other
Mycosphaerella graminicola
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_03070
Aegilops tauschii
F775_03070
I
0.000
OPUNC06G04640
Oryza punctata
OPUNC06G04640
I
0.000
Sb10g006570
Sorghum bicolor
Sb10g006570
I
0.000
BGIOSGA021814
Oryza indica
BGIOSGA021814
N
0.000
F775_23221
Aegilops tauschii
F775_23221
N
0.000
F775_23301
Aegilops tauschii
F775_23301
N
0.000
F775_23426
Aegilops tauschii
F775_23426
N
0.000
LPERR06G04370
Leersia perrieri
LPERR06G04370
N
0.000
LPERR06G04400
Leersia perrieri
LPERR06G04400
N
0.000
LPERR06G12030
Leersia perrieri
LPERR06G12030
N
0.000
LPERR10G06560
Leersia perrieri
LPERR10G06560
N
0.000
MLOC_51337
Hordeum vulgare
MLOC_51337
N
0.000
Traes_1AL_FF8F7A939
Triticum aestivum
Traes_1AL_FF8F7A939
N
0.000
TRIUR3_31433
Triticum urartu
TRIUR3_31433
N
0.000
TRIUR3_33433
Triticum urartu
TRIUR3_33433
N
0.000