fgenesh1_pg.sca_60_chr3_6_0000027 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_60_chr3_6_0000027 T390269_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_60_chr3_6_0000027 Zinc cluster 14 55

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N
Solyc05g018350.2 Solanum lycopersicum Solyc05g018350.2 N
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N
Cla015679 Citrullus lanatus Cla015679 N
Pm013502 Prunus mume Pm013502 N
Cucsa.358990 Cucumis sativus Cucsa.358990 N
Bostr.19424s0179 Boechera stricta Bostr.19424s0179 N
Ciclev10008866m.g Citrus clementina Ciclev10008866m.g N
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N
MDP0000276691 Malus domestica MDP0000276691 N
MDP0000500940 Malus domestica MDP0000500940 N
orange1.1g019823m.g Citrus sinensis orange1.1g019823m.g N
Thhalv10002883m.g Eutrema salsugineum Thhalv10002883m.g N