fgenesh1_pg.sca_82_chr10_2_0000336 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_82_chr10_2_0000336 T390290_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-4
M01430_2.00 		Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN		 PBM
Lambert et al.(2019)
pTH8909 		0.586 0.872
nirA
M01350_2.00 		Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS		 PBM
Lambert et al.(2019)
pEX0399 		0.581 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_82_chr10_2_0000336 Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CLUG_03901 Candida lusitaniae CLUG_03901 N 0.000
PICST_40526 Scheffersomyces stipitis PICST_40526 N 0.000
e_gwh1.2.1.1777.1 Pichia stipitis e_gwh1.2.1.1777.1 N 0.000