fgenesh1_pm.sca_11_chr8_3_0000161 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.sca_11_chr8_3_0000161 T390319_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_11_chr8_3_0000161 Zinc cluster 8 47

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0400s0200 Salix purpurea SapurV1A.0400s0200 I 0.000
POPTR_0012s13910 Populus trichocarpa POPTR_0012s13910 I 0.000
scaffold_500562.1 Arabidopsis lyrata scaffold_500562.1 I 0.000
evm.TU.supercontig_1.339 Carica papaya evm.TU.supercontig_1.339 I 0.000
evm.TU.supercontig_1.335 Carica papaya evm.TU.supercontig_1.335 I 0.000
cassava11118.m1 Manihot esculenta cassava11118.m1 I 0.000
cassava35977.valid.m1 Manihot esculenta cassava35977.valid.m1 I 0.000
Bo00285s360 Brassica oleracea Bo00285s360 I 0.000
Eucgr.A02814 Eucalyptus grandis Eucgr.A02814 I 0.000
Bostr.0556s0333 Boechera stricta Bostr.0556s0333 I 0.000
Cucsa.161230 Cucumis sativus Cucsa.161230 N 0.000
SapurV1A.0068s0590 Salix purpurea SapurV1A.0068s0590 N 0.000
MDP0000288452 Malus domestica MDP0000288452 N 0.000
Gorai.009G123600 Gossypium raimondii Gorai.009G123600 N 0.000
Gorai.008G280400 Gossypium raimondii Gorai.008G280400 N 0.000
gene26806-v1.0-hybrid Fragaria vesca gene26806-v1.0-hybrid N 0.000
mgf017470m Mimulus guttatus mgf017470m N 0.000
Cucsa.250990 Cucumis sativus Cucsa.250990 N 0.000
29613.m000372 Ricinus communis 29613.m000372 N 0.000
Pm016263 Prunus mume Pm016263 N 0.000
Ca_16884 Cicer arietinum Ca_16884 N 0.000
VIT_16s0100g00440 Vitis vinifera VIT_16s0100g00440 N 0.000
TCM_035123 Theobroma cacao TCM_035123 N 0.000
PRUPE_ppa024504mg Prunus persica PRUPE_ppa024504mg N 0.000
MTR_5g093010 Medicago truncatula MTR_5g093010 N 0.000
GLYMA14G02440 Glycine max GLYMA14G02440 N 0.000