CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pm.sca_33_chr6_1_0000053
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_33_chr6_1_0000053
T390349_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_33_chr6_1_0000053
Zinc cluster
11
50
GSCWPCKKRRIKCDLAKPICSRCAKVGASCDYNTRLIRWS
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FPSE_05364
Fusarium pseudograminearum
FPSE_05364
N
0.629
estExt_Genewise1Plus.C_260021
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_260021
N
0.538
VDAG_06371
Verticillium dahliae
VDAG_06371
N
0.593
V499_02546
Pseudogymnoascus pannorum
V499_02546
N
0.550
SETTUDRAFT_147291
Setosphaeria turcica
SETTUDRAFT_147291
N
0.538
SAPIO_CDS7978
Scedosporium apiospermum
SAPIO_CDS7978
N
0.586
PVAR5_4503
Byssochlamys spectabilis
PVAR5_4503
N
0.539
PFICI_10851
Pestalotiopsis fici
PFICI_10851
N
0.572
OIDMADRAFT_104528
Oidiodendron maius
OIDMADRAFT_104528
N
0.539
NechaG94027
Fusarium solani
NechaG94027
N
0.683
MGG_15021
Magnaporthe oryzae
MGG_15021
N
0.591
FVEG_10069
Fusarium verticillioides
FVEG_10069
N
0.646
CFIO01_00876
Colletotrichum fioriniae
CFIO01_00876
N
0.591
FOXG_11743
Fusarium oxysporum
FOXG_11743
N
0.646
FGRRES_03912
Fusarium graminearum
FGRRES_03912
N
0.621
FFUJ_09328
Fusarium fujikuroi
FFUJ_09328
N
0.646
COCVIDRAFT_110225
Bipolaris victoriae
COCVIDRAFT_110225
N
0.538
COCSADRAFT_33801
Bipolaris sorokiniana
COCSADRAFT_33801
N
0.538
COCMIDRAFT_108257
Bipolaris oryzae
COCMIDRAFT_108257
N
0.538
COCCADRAFT_103070
Bipolaris zeicola
COCCADRAFT_103070
N
0.538
COCC4DRAFT_203966
Bipolaris maydis
COCC4DRAFT_203966
N
0.538
Cob_01455
Colletotrichum orbiculare
Cob_01455
N
0.606
CGGC5_5698
Colletotrichum gloeosporioides
CGGC5_5698
N
0.587
CGGC5_10948
Colletotrichum gloeosporioides
CGGC5_10948
N
0.589