4848_YBR240C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 4848_YBR240C T390856_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THI2
M08647_2.00 		Saccharomyces cerevisiae
NMNKNNNBNNBBNNNNCCGH
DCGGNNNNVVNNVNNNMNKN		 Misc
DeBoer et al.(2011)
YBR240C_1449 		0.683 1.000
THI2
M08467_2.00 		Saccharomyces cerevisiae
GGMAACYSWWAGARC
GYTCTWWSRGTTKCC		 COMPILED
Mathelier et al.(2014)
MA0407.1 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4848_YBR240C Zinc cluster 28 66

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THI2 Saccharomyces cerevisiae YBR240C D 0.683
SU7_0277 Saccharomyces arboricola SU7_0277 I 0.683
SAKL0A06072g Lachancea kluyveri SAKL0A06072g I 0.619
Kwal_1631 Kluyveromyces waltii Kwal_1631 I 0.604
KLTH0H05720g Kluyveromyces thermotolerans KLTH0H05720g I 0.586
2117_YBR240C Saccharomyces bayanus 2117_YBR240C I 0.654
1967_YBR240C Saccharomyces paradoxus 1967_YBR240C I 0.683
Scas_Contig597.4 Saccharomyces castellii Scas_Contig597.4 I 0.603
ZYRO0G21626g Zygosaccharomyces rouxii ZYRO0G21626g I 0.610
ZBAI_07794 Zygosaccharomyces bailii ZBAI_07794 I 0.544
ZBAI_04285 Zygosaccharomyces bailii ZBAI_04285 I 0.544
TDEL_0B04000 Torulaspora delbrueckii TDEL_0B04000 I 0.601
AACERI_AaceriAFL033W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL033W I 0.584
SKUD_138702 Saccharomyces kudriavzevii SKUD_138702 I 0.683
NDAI_0F02050 Naumovozyma dairenensis NDAI_0F02050 I 0.604
NCAS_0H01240 Naumovozyma castellii NCAS_0H01240 I 0.603
LALA0_S13e03268g Lachancea lanzarotensis LALA0_S13e03268g I 0.584
Kpol_534p28 Vanderwaltozyma polyspora Kpol_534p28 I 0.586
KLTH0H05720g Lachancea thermotolerans KLTH0H05720g I 0.586
KLLA0_F10373g Kluyveromyces lactis KLLA0_F10373g I 0.611
KAFR_0G03520 Kazachstania africana KAFR_0G03520 I 0.620
Ecym_2263 Eremothecium cymbalariae Ecym_2263 I 0.619
AGOS_AFL033W Ashbya gossypii AGOS_AFL033W I 0.584