CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_12014
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_12014
T391203_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_04109
M02576_2.00
Fusarium graminearum
NNNCGGNNNN
NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH8226
0.683
0.975
NCU00445
M02586_2.00
Neurospora crassa
NNCGGNNNNN
NNNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8914
0.676
0.975
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_12014
Zinc cluster
91
136
QACIPCRRRKVRCDLGSVDNPHDPPCVRCRRESKECYFSATRRKRK
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_11073
Fusarium fujikuroi
FFUJ_11073
N
0.000
M437DRAFT_86792
Aureobasidium melanogenum
M437DRAFT_86792
N
0.000
M438DRAFT_371368
Aureobasidium pullulans
M438DRAFT_371368
N
0.000