CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_6000694
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.C_scaffold_6000694
T391328_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_6000694
Zinc cluster
66
108
VACGRCRKRKIRCSGDSGGGQPCDNCKNSGTEQCLFLRVRSTL
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG19060
Caenorhabditis briggsae
CBG19060
N
CRE08643
Caenorhabditis remanei
CRE08643
N
CRE18739
Caenorhabditis remanei
CRE18739
N
CRE18740
Caenorhabditis remanei
CRE18740
N
CRE27297
Caenorhabditis remanei
CRE27297
N
nhr-107
Caenorhabditis elegans
WBGene00003697
N
nhr-139
Caenorhabditis elegans
WBGene00016365
N