XP_002491498.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002491498.1 T392301_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAP1
M00097_2.00 		Saccharomyces cerevisiae
HCGGVNNWH
DWNNBCCGD		 PBM
Badis et al.(2008)
HAP1_2139 		0.565 0.649
HAP1
M00925_2.00 		Saccharomyces cerevisiae
NCGGABWTA
TAWVTCCGN		 PBM
Gordan et al.(2011)
Hap1 		0.565 0.649
HAP1
M07523_2.00 		Saccharomyces cerevisiae
CGGABWTW
WAWVTCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0312.1 		0.565 0.649
HAP1
M08680_2.00 		Saccharomyces cerevisiae
GGMRWTAHCGS
SCGDTAWYKCC		 Misc
DeBoer et al.(2011)
YLR256W_376 		0.565 0.649
HAP1
M11481_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HAP1_B 		0.565 0.649
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002491498.1 Zinc cluster 25 63

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_01363 Colletotrichum fioriniae CFIO01_01363 N
CGGC5_13848 Colletotrichum gloeosporioides CGGC5_13848 N
CH063_09851 Colletotrichum higginsianum CH063_09851 N
Cob_08011 Colletotrichum orbiculare Cob_08011 N
CSUB01_03526 Colletotrichum sublineola CSUB01_03526 N
GGTG_01539 Gaeumannomyces graminis GGTG_01539 N
GLRG_04468 Colletotrichum graminicola GLRG_04468 N
UCRPA7_3950 Togninia minima UCRPA7_3950 N