CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra027736
(
Brassica rapa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bra027736
T001186_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra027736.1-P
AP2
118
169
KLYRGVRQRHWGKWAAGIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGE
Links
Other
AP2
family TFs
Other
Brassica rapa
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m010825
Ricinus communis
30190.m010825
I
0.701
Bo9g030900
Brassica oleracea
Bo9g030900
I
0.711
Bostr.29223s0053
Boechera stricta
Bostr.29223s0053
I
0.701
Bra027697
Brassica rapa
Bra027697
I
0.711
Cagra.0062s0002
Capsella grandiflora
Cagra.0062s0002
I
0.701
Carubv10020622m.g
Capsella rubella
Carubv10020622m.g
I
0.701
cassava42814.valid.m1
Manihot esculenta
cassava42814.valid.m1
I
0.689
Ca_15031
Cicer arietinum
Ca_15031
I
0.692
chr2.CM0060.390.nc
Lotus japonicus
chr2.CM0060.390.nc
I
0.701
Ciclev10021265m.g
Citrus clementina
Ciclev10021265m.g
I
0.686
Cla011093
Citrullus lanatus
Cla011093
I
0.701
ERF061
Arabidopsis thaliana
AT1G64380
I
0.701
Eucgr.E00857
Eucalyptus grandis
Eucgr.E00857
I
0.701
fgenesh2_kg.2__42__AT1G64380.1
Arabidopsis lyrata
fgenesh2_kg.2__42__AT1G64380.1
I
0.701
gene32084-v1.0-hybrid
Fragaria vesca
gene32084-v1.0-hybrid
I
0.701
GLYMA01G43450
Glycine max
GLYMA01G43450
I
0.701
GLYMA11G02050
Glycine max
GLYMA11G02050
I
0.701
Gorai.004G133800
Gossypium raimondii
Gorai.004G133800
I
0.692
Lus10001898.g
Linum usitatissimum
Lus10001898.g
I
0.701
Lus10003889.g
Linum usitatissimum
Lus10003889.g
I
0.701
MDP0000292965
Malus domestica
MDP0000292965
I
0.701
MDP0000861708
Malus domestica
MDP0000861708
I
0.701
mgf021167m
Mimulus guttatus
mgf021167m
I
0.701
MTR_5g009410
Medicago truncatula
MTR_5g009410
I
0.711
orange1.1g045091m.g
Citrus sinensis
orange1.1g045091m.g
I
0.686
PGSC0003DMG400012154
Solanum tuberosum
PGSC0003DMG400012154
I
0.711
PK09586.1
Cannabis sativa
PK09586.1
I
0.711
Pm024053
Prunus mume
Pm024053
I
0.701
POPTR_0001s10540
Populus trichocarpa
POPTR_0001s10540
I
0.701
POPTR_0003s13910
Populus trichocarpa
POPTR_0003s13910
I
0.698
PRUPE_ppa009005mg
Prunus persica
PRUPE_ppa009005mg
I
0.701
SapurV1A.0035s0570
Salix purpurea
SapurV1A.0035s0570
I
0.701
SapurV1A.0237s0310
Salix purpurea
SapurV1A.0237s0310
I
0.701
Solyc08g082210.2
Solanum lycopersicum
Solyc08g082210.2
I
0.711
TCM_016452
Theobroma cacao
TCM_016452
I
0.699
Thhalv10023588m.g
Eutrema salsugineum
Thhalv10023588m.g
I
0.701
VIT_02s0025g01360
Vitis vinifera
VIT_02s0025g01360
I
0.699