GSMUA_Achr10G19950_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr10G19950_001 T002282_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.737 0.694
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.737 0.694
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.737 0.694
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.737 0.694
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.697 0.633
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.697 0.633
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.679 0.694
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.678 0.653
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.677 0.673
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.677 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P19950_001 AP2 365 416

Links

Other AP2 family TFs
Other Musa acuminata TFs

402 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA021526 Oryza indica BGIOSGA021526 N
BRADI1G44270 Brachypodium distachyon BRADI1G44270 N
LPERR06G08490 Leersia perrieri LPERR06G08490 N
OBART06G09580 Oryza barthii OBART06G09580 N
OGLUM06G10380 Oryza glumaepatula OGLUM06G10380 N
OLONG_020517 Oryza longistaminata OLONG_020517 N
OMERI06G11370 Oryza meridionalis OMERI06G11370 N
OPUNC06G09140 Oryza punctata OPUNC06G09140 N
ORGLA06G0090600 Oryza glaberrima ORGLA06G0090600 N
ORUFI06G09920 Oryza rufipogon ORUFI06G09920 N
OS06G0252300 Oryza sativa OS06G0252300 N
Si005790m.g Setaria italica Si005790m.g N
TRIUR3_08913 Triticum urartu TRIUR3_08913 N
TRIUR3_19801 Triticum urartu TRIUR3_19801 N