CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr5G07400_001
(
Musa acuminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GSMUA_Achr5G07400_001
T002395_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
abi4
M02648_2.00
Zea mays
CGSYGCYBYB
VRVRGCRSCG
SELEX
Mathelier et al.(2014)
MA0123.1
0.794
0.920
abi4
M09706_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABI4_01
0.794
0.920
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr5P07400_001
AP2
69
120
FRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAAKAYDRAALILYGP
Links
Other
AP2
family TFs
Other
Musa acuminata
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL001746
Aedes aegypti
AAEL001746
N
AALB004295
Anopheles albimanus
AALB004295
N
AARA007504
Anopheles arabiensis
AARA007504
N
AATE004568
Anopheles atroparvus
AATE004568
N
ACHR009875
Anopheles christyi
ACHR009875
N
ACOM024819
Anopheles coluzzii
ACOM024819
N
ACUA022741
Anopheles culicifacies
ACUA022741
N
ADAC003960
Anopheles darlingi
ADAC003960
N
ADIR008109
Anopheles dirus
ADIR008109
N
AEPI007105
Anopheles epiroticus
AEPI007105
N
AFAF019435
Anopheles farauti
AFAF019435
N
AFUN008135
Anopheles funestus
AFUN008135
N
AMEC005987
Anopheles melas
AMEC005987
N
AMIN010921
Anopheles minimus
AMIN010921
N
GA19443
Drosophila pseudoobscura
FBgn0079439
N
gce
Drosophila melanogaster
FBgn0261703
N
GD17204
Drosophila simulans
FBgn0188768
N
GE17175
Drosophila yakuba
FBgn0234654
N
GF21231
Drosophila ananassae
FBgn0098233
N
GH17616
Drosophila grimshawi
FBgn0125086
N
GH24193
Drosophila grimshawi
FBgn0131649
N
GI14831
Drosophila mojavensis
FBgn0137582
N
GI21773
Drosophila mojavensis
FBgn0144503
N
GJ16946
Drosophila virilis
FBgn0204124
N
GK10105
Drosophila willistoni
FBgn0212120
N
GK16199
Drosophila willistoni
FBgn0218201
N
LCUP002267
Lucilia cuprina
LCUP002267
N
MDOA000001
Musca domestica
MDOA000001
N
MDOA014837
Musca domestica
MDOA014837
N
Met
Drosophila virilis
FBgn0262800
N
PPAI009130
Phlebotomus papatasi
PPAI009130
N