CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LPERR06G06370
(
Leersia perrieri
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
LPERR06G06370
T002621_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.782
0.960
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.768
0.920
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.749
0.920
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR06G06370.1
AP2
29
80
RQYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGS
Links
Other
AP2
family TFs
Other
Leersia perrieri
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CC1G_07060
Coprinopsis cinerea
CC1G_07060
N
0.000
CERSUDRAFT_86751
Ceriporiopsis subvermispora
CERSUDRAFT_86751
N
0.000
CERSUDRAFT_97877
Ceriporiopsis subvermispora
CERSUDRAFT_97877
N
0.000
CY34DRAFT_84354
Suillus luteus
CY34DRAFT_84354
N
0.000
FIBRA_08916
Fibroporia radiculosa
FIBRA_08916
N
0.000
GALMADRAFT_137835
Galerina marginata
GALMADRAFT_137835
N
0.000
GLOTRDRAFT_130692
Gloeophyllum trabeum
GLOTRDRAFT_130692
N
0.000
K443DRAFT_126823
Laccaria amethystina
K443DRAFT_126823
N
0.000
LACBIDRAFT_296988
Laccaria bicolor
LACBIDRAFT_296988
N
0.000
M378DRAFT_159357
Amanita muscaria
M378DRAFT_159357
N
0.000
M404DRAFT_119566
Pisolithus tinctorius
M404DRAFT_119566
N
0.000
M408DRAFT_21352
Serendipita vermifera
M408DRAFT_21352
N
0.000
M408DRAFT_289466
Serendipita vermifera
M408DRAFT_289466
N
0.000
M413DRAFT_446911
Hebeloma cylindrosporum
M413DRAFT_446911
N
0.000
MYCTH_44604
Myceliophthora thermophila
MYCTH_44604
N
0.000
PAXINDRAFT_117064
Paxillus involutus
PAXINDRAFT_117064
N
0.000
PAXRUDRAFT_822141
Paxillus rubicundulus
PAXRUDRAFT_822141
N
0.000
PHLGIDRAFT_33887
Phlebiopsis gigantea
PHLGIDRAFT_33887
N
0.000
PIIN_00114
Piriformospora indica
PIIN_00114
N
0.000
PILCRDRAFT_6451
Piloderma croceum
PILCRDRAFT_6451
N
0.000
PLEOSDRAFT_33270
Pleurotus ostreatus
PLEOSDRAFT_33270
N
0.000
PLICRDRAFT_116400
Plicaturopsis crispa
PLICRDRAFT_116400
N
0.000
SCHCODRAFT_257056
Schizophyllum commune
SCHCODRAFT_257056
N
0.000
SCLCIDRAFT_107566
Scleroderma citrinum
SCLCIDRAFT_107566
N
0.000
SERLA73DRAFT_181398
Serpula lacrymans
SERLA73DRAFT_181398
N
0.000