MLOC_58276 (Hordeum vulgare)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MLOC_58276 T002714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.755 0.796
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.755 0.796
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.753 0.837
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.745 0.796
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.729 0.796
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.717 0.776
0100010458
M01644_2.00 		Ostreococcus tauri
MGCCGSCR
YGSCGGCK		 PBM
Weirauch et al.(2014)
pTH9447 		0.703 0.735
HRE1
M06595_2.00 		Arabidopsis thaliana
NHNBMDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHKVNDN		 Dap-seq
OMalley et al.(2016)
ERF73_col_a 		0.697 0.694
HRE1
M06596_2.00 		Arabidopsis thaliana
HNYHDMHNYCDCCGCCGCCRY
RYGGCGGCGGHGRNDKHDRND		 Dap-seq
OMalley et al.(2016)
ERF73_colamp_a 		0.697 0.694
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.686 0.653
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.680 0.694
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_58276.1 AP2 128 179

Links

Other AP2 family TFs
Other Hordeum vulgare TFs

375 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000944601 Angiostrongylus cantonensis ACAC_0000944601 N
ACOC_0000427301 Angiostrongylus costaricensis ACOC_0000427301 N
ANCCAN_09721 Ancylostoma caninum ANCCAN_09721 N
ANCCEY_10965 Ancylostoma ceylanicum ANCCEY_10965 N
DICVIV_11917 Dictyocaulus viviparus DICVIV_11917 N
Hba_21573 Heterorhabditis bacteriophora Hba_21573 N
HCOI00234300 Haemonchus contortus HCOI00234300 N
HPBE_0000939901 Heligmosomoides bakeri HPBE_0000939901 N
NBR_0000626701 Nippostrongylus brasiliensis NBR_0000626701 N
NECAME_05105 Necator americanus NECAME_05105 N
SVUK_0001597001 Strongylus vulgaris SVUK_0001597001 N
TELCIR_04506 Teladorsagia circumcincta TELCIR_04506 N