OBART02G35950 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART02G35950 T003096_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.852 0.961
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.852 0.961
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.722 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G35950.1 AP2 6 57

Links

Other AP2 family TFs
Other Oryza barthii TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG04311 Caenorhabditis briggsae CBG04311 I
CBN12606 Caenorhabditis brenneri CBN12606 I
CBN19589 Caenorhabditis brenneri CBN19589 I
CG42741 Drosophila melanogaster FBgn0261705 D
CJA34076 Caenorhabditis japonica CJA34076 I
CRE26517 Caenorhabditis remanei CRE26517 I
D915_05082 Fasciola hepatica D915_05082 I
ECANG7_07352 Echinococcus canadensis ECANG7_07352 I
EmuJ_000608700 Echinococcus multilocularis EmuJ_000608700 I
ENSPMAG00000002754 Petromyzon marinus ENSPMAG00000002754 I
GA22108 Drosophila pseudoobscura FBgn0064422 I
GD25089 Drosophila simulans FBgn0196401 I
GE11614 Drosophila yakuba FBgn0229413 I
GF11307 Drosophila ananassae FBgn0088347 I
GG20076 Drosophila erecta FBgn0112270 I
GH20915 Drosophila grimshawi FBgn0128377 I
GI18350 Drosophila mojavensis FBgn0141089 I
GJ20749 Drosophila virilis FBgn0207886 I
GK19604 Drosophila willistoni FBgn0221602 I
GL10855 Drosophila persimilis FBgn0148465 I
GM15591 Drosophila sechellia FBgn0170509 I
HmN_000013000 Hymenolepis microstoma HmN_000013000 I
HNAJ_0000523901 Hymenolepis nana HNAJ_0000523901 I
klf-3 Caenorhabditis elegans WBGene00003480 D
LCUP006184 Lucilia cuprina LCUP006184 I
LLOJ006638 Lutzomyia longipalpis LLOJ006638 I
MCOS_0000326501 Mesocestoides corti MCOS_0000326501 I
MDOA005423 Musca domestica MDOA005423 I
TASK_0000897201 Taenia asiatica TASK_0000897201 I
TsM_000798900 Taenia solium TsM_000798900 I