ONIVA04G17660 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA04G17660 T003589_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.824 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.824 0.920
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.808 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA04G17660.1 AP2 213 264

Links

Other AP2 family TFs
Other Oryza nivara TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP11445 Atta cephalotes ACEP11445 N
Bm9570 Brugia malayi Bm9570 N
Cflo_10839--XP_001121050.1_APIME Camponotus floridanus Cflo_10839--XP_001121050.1_APIME N
EEL_0000450601 Elaeophora elaphi EEL_0000450601 N
LOAG_01844 Loa loa LOAG_01844 N
nAv.1.0.1.g08358 Acanthocheilonema viteae nAv.1.0.1.g08358 N
nDi.2.2.2.g04230 Dirofilaria immitis nDi.2.2.2.g04230 N
nLs.2.1.2.g01927 Litomosoides sigmodontis nLs.2.1.2.g01927 N
nOo.2.0.1.g00726 Onchocerca ochengi nOo.2.0.1.g00726 N
OFLC_0001331201 Onchocerca flexuosa OFLC_0001331201 N
SINV12288 Solenopsis invicta SINV12288 N
WBGene00239724 Onchocerca volvulus WBGene00239724 N
WUBG_01872 Wuchereria bancrofti WUBG_01872 N