ORGLA05G0107600 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA05G0107600 T003901_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84ND8_HORVU
M09719_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF11_01 		0.703 0.900
Q84JE9_HORVU
M09718_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF13_01 		0.703 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA05G0107600.1 AP2 87 138

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm5193 Brugia malayi Bm5193 N
BTMF_0001049501 Brugia timori BTMF_0001049501 N
EVEC_0000082801 Enterobius vermicularis EVEC_0000082801 N
Hba_13962 Heterorhabditis bacteriophora Hba_13962 N
L596_g5733 Steinernema carpocapsae L596_g5733 N
LOAG_18198 Loa loa LOAG_18198 N
nDi.2.2.2.g04995 Dirofilaria immitis nDi.2.2.2.g04995 N
nOo.2.0.1.g00989 Onchocerca ochengi nOo.2.0.1.g00989 N
OFLC_0001389501 Onchocerca flexuosa OFLC_0001389501 N
PEQ_0000470601 Parascaris equorum PEQ_0000470601 N
SMUV_0000902201 Syphacia muris SMUV_0000902201 N
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 N
WBGene00240603 Onchocerca volvulus WBGene00240603 N
WUBG_03267 Wuchereria bancrofti WUBG_03267 N