CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFL1085w
(
Plasmodium falciparum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PFL1085w
T004325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PFL1085w
M00584_2.00
Plasmodium falciparum
RMGTACAC
GTGTACKY
PBM
Campbell et al.(2010)
PFL1085w
(Direct)
(Direct)
PFL1085w
M01638_2.00
Plasmodium falciparum
NVGYGTACRNN
NNYGTACRCBN
PBM
Weirauch et al.(2014)
pTH8569
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00584_2.00
AP2
37
91
PIHSVWKDTTRGHCSWRCRWWENGRRLSKNFNVKRFGNDGALRMAITMKLKKSNP
M01638_2.00
AP2
52
106
PIHSVWKDTTRGHCSWRCRWWENGRRLSKNFNVKRFGNDGALRMAITMKLKKSNP
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PFL1085w:pep
AP2
2159
2213
PIHSVWKDTTRGHCSWRCRWWENGRRLSKNFNVKRFGNDGALRMAITMKLKKSNP
Links
Other
AP2
family TFs
Other
Plasmodium falciparum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_01094
Allomyces macrogynus
AMAG_01094
N
AMAG_05277
Allomyces macrogynus
AMAG_05277
N
FFUJ_03124
Fusarium fujikuroi
FFUJ_03124
I
fgenesh1_pg.sca_3_chr4_2_0000651
Nectria haematococca
fgenesh1_pg.sca_3_chr4_2_0000651
I
FGRRES_16711
Fusarium graminearum
FGRRES_16711
I
FOXG_02079
Fusarium oxysporum
FOXG_02079
I
FPSE_09096
Fusarium pseudograminearum
FPSE_09096
I
FVEG_05240
Fusarium verticillioides
FVEG_05240
I
GLOINDRAFT_225597
Rhizophagus irregularis
GLOINDRAFT_225597
N
NechaG79250
Fusarium solani
NechaG79250
I