PGSC0003DMG400026035 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400026035 T004469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TINY
M01094_2.00 		Arabidopsis thaliana
NHRCCGACAN
NTGTCGGYDN		 PBM
Lambert et al.(2019)
pTH11541 		0.779 0.880
TINY
M06669_2.00 		Arabidopsis thaliana
HNYCRCCGACANHDN
NHDNTGTCGGYGRND		 Dap-seq
OMalley et al.(2016)
TINY_col_a 		0.779 0.880
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.717 0.920
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.717 0.920
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.704 0.880
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.704 0.880
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.685 0.820
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.685 0.820
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.685 0.820
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.678 0.880
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.677 0.860
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.677 0.860
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.677 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400066977 AP2 91 142

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL012662 Aedes aegypti AAEL012662 I
AALB000262 Anopheles albimanus AALB000262 I
AARA009464 Anopheles arabiensis AARA009464 I
AATE002862 Anopheles atroparvus AATE002862 I
ACHR010105 Anopheles christyi ACHR010105 I
ACOM040689 Anopheles coluzzii ACOM040689 I
ACUA018540 Anopheles culicifacies ACUA018540 I
ACYPI000273 Acyrthosiphon pisum ACYPI000273 I
ACYPI32959 Acyrthosiphon pisum ACYPI32959 I
ADIR000678 Anopheles dirus ADIR000678 I
AEPI003166 Anopheles epiroticus AEPI003166 I
AFAF012456 Anopheles farauti AFAF012456 I
AFUN009249 Anopheles funestus AFUN009249 I
AGAP028176 Anopheles gambiae AGAP028176 I
AMEC020491 Anopheles melas AMEC020491 I
AMEM000284 Anopheles merus AMEM000284 I
AMIN001682 Anopheles minimus AMIN001682 I
AQUA011502 Anopheles quadriannulatus AQUA011502 I
ASIS012186 Anopheles sinensis ASIS012186 I
ASTEI01901 Anopheles stephensi ASTEI01901 I
BGIBMGA007303 Bombyx mori BGIBMGA007303 I
BGLB006797 Biomphalaria glabrata BGLB006797 I
CapteG206308 Capitella teleta CapteG206308 I
Cflo_05077--XP_624468.1_APIME Camponotus floridanus Cflo_05077--XP_624468.1_APIME I
Cflo_09823--XP_001121050.1_APIME Camponotus floridanus Cflo_09823--XP_001121050.1_APIME I
CGI_10020332 Crassostrea gigas CGI_10020332 I
CLEC008492 Cimex lectularius CLEC008492 I
CLEC012303 Cimex lectularius CLEC012303 I
CPIJ010025 Culex quinquefasciatus CPIJ010025 I
CpipJ_CPIJ010025 Culex pipiens CpipJ_CPIJ010025 I
dimm Drosophila melanogaster FBgn0023091 D
ENSAMXG00000025873 Astyanax mexicanus ENSAMXG00000025873 I
ENSXMAG00000014837 Xiphophorus maculatus ENSXMAG00000014837 I
estExt_fgenesh2_pg.C_2400032 Branchiostoma floridae estExt_fgenesh2_pg.C_2400032 I
GA21247 Drosophila pseudoobscura FBgn0081235 I
GB44356 Apis mellifera GB44356 I
GB47718 Apis mellifera GB47718 I
GD24318 Drosophila simulans FBgn0195665 I
GF14327 Drosophila ananassae FBgn0091354 I
GG21298 Drosophila erecta FBgn0113477 I
GH13314 Drosophila grimshawi FBgn0120790 I
GI12220 Drosophila mojavensis FBgn0134977 I
GJ17849 Drosophila virilis FBgn0205017 I
GK18738 Drosophila willistoni FBgn0220736 I
GL26661 Drosophila persimilis FBgn0164242 I
HHAL006119-PA Halyomorpha halys HHAL006119-PA I
HMEL004962 Heliconius melpomene HMEL004962 I
Hsal_02552--XP_001121050.1_APIME Harpegnathos saltator Hsal_02552--XP_001121050.1_APIME I
Hsal_06132--XP_001121050.1_APIME Harpegnathos saltator Hsal_06132--XP_001121050.1_APIME I
KGM_17543 Danaus plexippus KGM_17543 I
L798_11629 Zootermopsis nevadensis L798_11629 I
L798_12706 Zootermopsis nevadensis L798_12706 I
LCUP013558 Lucilia cuprina LCUP013558 I
LDEC018804 Leptinotarsa decemlineata LDEC018804 I
LotgiG98055 Lottia gigantea LotgiG98055 I
MCINX009496 Melitaea cinxia MCINX009496 I
MDOA007359 Musca domestica MDOA007359 I
MESCA005415 Megaselia scalaris MESCA005415 I
NV10548 Nasonia vitripennis NV10548 I
NV21702 Nasonia vitripennis NV21702 I
Ocbimv22004730m.g Octopus bimaculoides Ocbimv22004730m.g I
PHUM567140 Pediculus humanus PHUM567140 I
RPRC000986 Rhodnius prolixus RPRC000986 I
Sakowv30016776m.g Saccoglossus kowalevskii Sakowv30016776m.g I
SINV24225 Solenopsis invicta SINV24225 I
SMAR011224 Strigamia maritima SMAR011224 I
TC006222 Tribolium castaneum TC006222 I
tetur09g04370 Tetranychus urticae tetur09g04370 I
YQE_07035 Dendroctonus ponderosae YQE_07035 I