POPTR_0017s08250 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0017s08250 T004741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.803 0.880
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.790 0.860
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.790 0.860
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.679 0.660
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.679 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s08250.1 AP2 274 325

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

544 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10010214 Chelonia mydas Cmyd_10010214 N 0.000
ENSAMEG00000007290 Ailuropoda melanoleuca ENSAMEG00000007290 N 0.000
ENSAPLG00000012750 Anas platyrhynchos ENSAPLG00000012750 N 0.000
ENSBTAP00000001994-D1 Bos grunniens ENSBTAP00000001994-D1 N 0.000
ENSCSAG00000012442 Chlorocebus sabaeus ENSCSAG00000012442 N 0.000
ENSMPUG00000008759 Mustela putorius furo ENSMPUG00000008759 N 0.000
ENSNLEG00000003582 Nomascus leucogenys ENSNLEG00000003582 N 0.000
ENSOARG00000005313 Ovis aries ENSOARG00000005313 N 0.000
ENSP00000287025 Macaca fascicularis ENSP00000287025 N 0.000
ENSPANG00000000418 Papio anubis ENSPANG00000000418 N 0.000
ENSPPYG00000018764 Pongo abelii ENSPPYG00000018764 N 0.000
ENSSHAG00000005026 Sarcophilus harrisii ENSSHAG00000005026 N 0.000
ENSSTOG00000008021 Ictidomys tridecemlineatus ENSSTOG00000008021 N 0.000
Gfo_R014552 Geospiza fortis Gfo_R014552 N 0.000
MTERF3 Vicugna pacos ENSVPAG00000004132 N 0.000
MTERF3 Tursiops truncatus ENSTTRG00000007349 N 0.000
MTERF3 Tupaia belangeri ENSTBEG00000002615 N 0.000
mterf3 Xenopus tropicalis XB-GENE-6454740 N 0.000
MTERF3 Sus scrofa ENSSSCG00000006090 N 0.000
MTERF3 Canis familiaris ENSCAFG00000009460 N 0.000
Mterf3 Rattus norvegicus ENSRNOG00000004492 N 0.000
MTERF3 Pan troglodytes ENSPTRG00000020441 N 0.000
MTERF3 Bos taurus ENSBTAG00000001522 N 0.000
MTERF3 Procavia capensis ENSPCAG00000009302 N 0.000
MTERF3 Dasypus novemcinctus ENSDNOG00000041739 N 0.000
MTERF3 Otolemur garnettii ENSOGAG00000004303 N 0.000
MTERF3 Oryctolagus cuniculus ENSOCUG00000004276 N 0.000
MTERF3 Choloepus hoffmanni ENSCHOG00000007893 N 0.000
Mterf3 Mus musculus ENSMUSG00000021519 N 0.000
MTERF3 Callithrix jacchus ENSCJAG00000020561 N 0.000
MTERF3 Monodelphis domestica ENSMODG00000006966 N 0.000
MTERF3 Macaca mulatta ENSMMUG00000008808 N 0.000
MTERF3 Myotis lucifugus ENSMLUG00000007186 N 0.000
MTERF3 Loxodonta africana ENSLAFG00000002544 N 0.000
MTERF3 Gorilla gorilla ENSGGOG00000011535 N 0.000
MTERF3 Homo sapiens ENSG00000156469 N 0.000
MTERF3 Felis catus ENSFCAG00000028511 N 0.000
MTERF3 Echinops telfairi ENSETEG00000011372 N 0.000
MTERF3 Equus caballus ENSECAG00000012943 N 0.000
Mterf3 Dipodomys ordii ENSDORG00000010477 N 0.000
Myotis_brandtii_MTERFD1_10032119 Myotis brandtii Myotis_brandtii_MTERFD1_10032119 N 0.000