VIT_19s0090g01080 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_19s0090g01080 T006144_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.778 0.894
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.778 0.894
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.778 0.894
PK17878.1
M01099_2.00 		Cannabis sativa
CGCCGYCR
YGRCGGCG		 PBM
Lambert et al.(2019)
pTH10133 		0.743 0.830
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.708 0.787
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.708 0.787
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.708 0.787
OS05G0497200
M01636_2.00 		Oryza sativa
CGSCGCCR
YGGCGSCG		 PBM
Weirauch et al.(2014)
pTH8640 		0.698 0.766
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.692 0.745
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.692 0.745
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.689 0.745
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.687 0.809
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.687 0.809
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.687 0.809
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.684 0.745
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.684 0.745
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.678 0.766
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.678 0.766
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.678 0.766
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_19s0090g01080.t01 AP2 63 114

Links

Other AP2 family TFs
Other Vitis vinifera TFs

390 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA006778 Anopheles arabiensis AARA006778 N
ACEP24927 Atta cephalotes ACEP24927 N
ACOM042119 Anopheles coluzzii ACOM042119 N
ADIR009007 Anopheles dirus ADIR009007 N
AEPI002762 Anopheles epiroticus AEPI002762 N
AFUN005065 Anopheles funestus AFUN005065 N
AGAP002164 Anopheles gambiae AGAP002164 N
AMIN003104 Anopheles minimus AMIN003104 N
AQUA008619 Anopheles quadriannulatus AQUA008619 N
br Drosophila melanogaster FBgn0000210 D
Cflo_02155--NP_001035356.1_APIME Camponotus floridanus Cflo_02155--NP_001035356.1_APIME N
CPIJ003270 Culex quinquefasciatus CPIJ003270 N
CpipJ_CPIJ003270 Culex pipiens CpipJ_CPIJ003270 N
GD24719 Drosophila simulans FBgn0196042 N
GE16699 Drosophila yakuba FBgn0234196 N
GG12869 Drosophila erecta FBgn0105144 N
HHAL005051-PA Halyomorpha halys HHAL005051-PA N
Hsal_01160--NP_001035356.1_APIME Harpegnathos saltator Hsal_01160--NP_001035356.1_APIME N
L798_01786 Zootermopsis nevadensis L798_01786 N
MDOA006186 Musca domestica MDOA006186 N
PHUM258420 Pediculus humanus PHUM258420 N
RPRC003967 Rhodnius prolixus RPRC003967 N
TC005475 Tribolium castaneum TC005475 N