Cla006213 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla006213 T006427_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.825 0.939
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.825 0.939
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.734 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla006213 AP2 6 55

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004458 Calypte anna Aan_R004458 I
Afo_R011755 Aptenodytes forsteri Afo_R011755 I
Alligator_sinensis_CCG019865.1 Alligator sinensis Alligator_sinensis_CCG019865.1 I
Brh_R002160 Buceros rhinoceros Brh_R002160 I
Cmyd_10010595 Chelonia mydas Cmyd_10010595 I
Cmyd_10013831 Chelonia mydas Cmyd_10013831 I
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I
ENSAMEG00000006403 Ailuropoda melanoleuca ENSAMEG00000006403 I
ENSAMXG00000003461 Astyanax mexicanus ENSAMXG00000003461 I
ENSAMXG00000012874 Astyanax mexicanus ENSAMXG00000012874 I
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I
ENSAPLG00000012971 Anas platyrhynchos ENSAPLG00000012971 I
ENSCSAG00000008037 Chlorocebus sabaeus ENSCSAG00000008037 I
ENSDORG00000016283 Dipodomys ordii ENSDORG00000016283 I
ENSFALG00000012601 Ficedula albicollis ENSFALG00000012601 I
ENSGALG00000006245 Gallus gallus ENSGALG00000006245 I
ENSGMOG00000000921 Gadus morhua ENSGMOG00000000921 I
ENSGMOG00000003751 Gadus morhua ENSGMOG00000003751 I
ENSLACG00000009512 Latimeria chalumnae ENSLACG00000009512 I
ENSLACG00000013240 Latimeria chalumnae ENSLACG00000013240 I
ENSLOCG00000011807 Lepisosteus oculatus ENSLOCG00000011807 I
ENSLOCG00000013716 Lepisosteus oculatus ENSLOCG00000013716 I
ENSMPUG00000017390 Mustela putorius furo ENSMPUG00000017390 I
ENSNLEG00000001047 Nomascus leucogenys ENSNLEG00000001047 I
ENSONIG00000003215 Oreochromis niloticus ENSONIG00000003215 I
ENSONIG00000009164 Oreochromis niloticus ENSONIG00000009164 I
ENSP00000296233 Macaca fascicularis ENSP00000296233 I
ENSPANG00000026096 Papio anubis ENSPANG00000026096 I
ENSPFOG00000002472 Poecilia formosa ENSPFOG00000002472 I
ENSPFOG00000003698 Poecilia formosa ENSPFOG00000003698 I
ENSPFOG00000012815 Poecilia formosa ENSPFOG00000012815 I
ENSPPYG00000013455 Pongo abelii ENSPPYG00000013455 I
ENSSHAG00000007635 Sarcophilus harrisii ENSSHAG00000007635 I
ENSXMAG00000001323 Xiphophorus maculatus ENSXMAG00000001323 I
ENSXMAG00000007908 Xiphophorus maculatus ENSXMAG00000007908 I
ENSXMAG00000013094 Xiphophorus maculatus ENSXMAG00000013094 I
Gfo_R014652 Geospiza fortis Gfo_R014652 I
gw.37.333.1 Branchiostoma floridae gw.37.333.1 I
gw.442.76.1 Branchiostoma floridae gw.442.76.1 I
KLF15 Tursiops truncatus ENSTTRG00000008498 I
klf15 Takifugu rubripes ENSTRUG00000014976 I
KLF15 Takifugu rubripes ENSTRUG00000006529 I
Klf15 Rattus norvegicus ENSRNOG00000017808 I
KLF15 Ochotona princeps ENSOPRG00000005237 I
klf15 Xenopus tropicalis XB-GENE-854149 I
KLF15 Pteropus vampyrus ENSPVAG00000004109 I
KLF15 Loxodonta africana ENSLAFG00000011970 I
KLF15 Cavia porcellus ENSCPOG00000005315 I
KLF15 Callithrix jacchus ENSCJAG00000006941 I
klf15 Danio rerio ENSDARG00000091127 I
KLF15 Dasypus novemcinctus ENSDNOG00000036157 I
KLF15 Equus caballus ENSECAG00000021092 I
KLF15 Homo sapiens ENSG00000163884 D
klf15 Gasterosteus aculeatus ENSGACG00000003717 I
KLF15 Gasterosteus aculeatus ENSGACG00000011317 I
KLF15 Canis familiaris ENSCAFG00000003807 I
KLF15 Gorilla gorilla ENSGGOG00000009916 I
KLF15 Meleagris gallopavo ENSMGAG00000007616 I
KLF15 Myotis lucifugus ENSMLUG00000010178 I
KLF15 Macaca mulatta ENSMMUG00000003721 I
Klf15 Mus musculus ENSMUSG00000030087 D
KLF15 Bos taurus ENSBTAG00000008313 I
KLF15 Ornithorhynchus anatinus ENSOANG00000014825 I
KLF15 Otolemur garnettii ENSOGAG00000000703 I
klf15 Oryzias latipes ENSORLG00000001165 I
KLF15 Procavia capensis ENSPCAG00000006301 I
klf15.2 Xenopus tropicalis XB-GENE-1018580 I
klf15.S Xenopus laevis XB-GENE-854150 I
Ogr01993 Ophisaurus gracilis Ogr01993 I
Ogr18174 Ophisaurus gracilis Ogr18174 I
Pvit_06090 Pogona vitticeps Pvit_06090 I
Pvit_11468 Pogona vitticeps Pvit_11468 I
Sakowv30044439m.g Saccoglossus kowalevskii Sakowv30044439m.g I
si:ch211-117k10.3 Danio rerio ENSDARG00000090914 I
si:ch211-117k10.3 Takifugu rubripes ENSTRUG00000000076 I
si:ch211-117k10.3 Tetraodon nigroviridis ENSTNIG00000007382 I
si:ch211-117k10.3 Oryzias latipes ENSORLG00000012237 I
SPU_015772 Strongylocentrotus purpuratus SPU_015772 I
Tal_R002960 Tyto alba Tal_R002960 I