Cla023512 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla023512 T006541_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.793 0.980
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla023512 AP2 22 73

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_143213 Agaricus bisporus AGABI2DRAFT_143213 N
BN946_scf184985.g64 Trametes cinnabarina BN946_scf184985.g64 N
BOTBODRAFT_62341 Botryobasidium botryosum BOTBODRAFT_62341 N
CERSUDRAFT_118233 Ceriporiopsis subvermispora CERSUDRAFT_118233 N
CY34DRAFT_811362 Suillus luteus CY34DRAFT_811362 N
DICSQDRAFT_163481 Dichomitus squalens DICSQDRAFT_163481 N
fgenesh1_pg.C_scaffold_4000408 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000408 N
fgenesh2_pg.C_scaffold_14000115 Heterobasidion annosum fgenesh2_pg.C_scaffold_14000115 N
GALMADRAFT_46548 Galerina marginata GALMADRAFT_46548 N
GLOTRDRAFT_138787 Gloeophyllum trabeum GLOTRDRAFT_138787 N
HETIRDRAFT_431082 Heterobasidion irregulare HETIRDRAFT_431082 N
JAAARDRAFT_196106 Jaapia argillacea JAAARDRAFT_196106 N
K443DRAFT_671746 Laccaria amethystina K443DRAFT_671746 N
LACBIDRAFT_296378 Laccaria bicolor LACBIDRAFT_296378 N
M378DRAFT_70504 Amanita muscaria M378DRAFT_70504 N
M413DRAFT_73437 Hebeloma cylindrosporum M413DRAFT_73437 N
Moror_17790 Moniliophthora roreri Moror_17790 N
PAXINDRAFT_99404 Paxillus involutus PAXINDRAFT_99404 N
PAXRUDRAFT_827663 Paxillus rubicundulus PAXRUDRAFT_827663 N
PHACADRAFT_260024 Phanerochaete carnosa PHACADRAFT_260024 N
PHLGIDRAFT_365607 Phlebiopsis gigantea PHLGIDRAFT_365607 N
PIIN_06096 Piriformospora indica PIIN_06096 N
PILCRDRAFT_820497 Piloderma croceum PILCRDRAFT_820497 N
PISMIDRAFT_102688 Pisolithus microcarpus PISMIDRAFT_102688 N
PLEOSDRAFT_1112913 Pleurotus ostreatus PLEOSDRAFT_1112913 N
SCHCODRAFT_236086 Schizophyllum commune SCHCODRAFT_236086 N
SCLCIDRAFT_1213805 Scleroderma citrinum SCLCIDRAFT_1213805 N
SERLA73DRAFT_159500 Serpula lacrymans SERLA73DRAFT_159500 N