Bostr.26675s0318 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.26675s0318 T007625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.902 0.942
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.853 0.923
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.827 0.808
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.827 0.808
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.741 0.654
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.728 0.692
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.728 0.692
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.728 0.692
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.724 0.654
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.724 0.654
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.721 0.692
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.721 0.692
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.709 0.731
Q84J59_MAIZE
M09717_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BD1_01 		0.707 0.692
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.704 0.673
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.704 0.673
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.704 0.673
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.704 0.673
ERF086
M06663_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYHD
HDRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
PUCHI_col_a 		0.703 0.712
ERF086
M06664_2.00 		Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN
NNNDHDDHDRCGGCGGMGDHDNNNN		 Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a 		0.703 0.712
ERF109
M00849_2.00 		Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RRTF1 		0.701 0.692
ERF109
M06653_2.00 		Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG		 Dap-seq
OMalley et al.(2016)
RRTF1_col_a 		0.701 0.692
ERF109
M06654_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a 		0.701 0.692
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.700 0.673
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.700 0.673
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.700 0.673
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.698 0.615
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.698 0.615
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.698 0.615
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.696 0.673
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.694 0.673
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.694 0.673
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.694 0.673
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.694 0.673
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.694 0.673
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.693 0.654
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.693 0.673
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.693 0.654
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.686 0.635
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.686 0.635
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.686 0.635
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.685 0.692
Q2TN80_WHEAT
M09715_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_02 		0.684 0.635
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.682 0.654
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26675s0318.1.p AP2 17 69

Links

Other AP2 family TFs
Other Boechera stricta TFs

1550 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004537 Ricinus communis 29929.m004537 I
AIL5 Arabidopsis lyrata fgenesh2_kg.8__1655__AT5G57390.1 I
AIL6 Arabidopsis thaliana AT5G10510 D
AMTR_s00019p00225230 Amborella trichopoda AMTR_s00019p00225230 I
AMTR_s00066p00028460 Amborella trichopoda AMTR_s00066p00028460 I
Aquca_010_00266 Aquilegia coerulea Aquca_010_00266 I
BGIOSGA008619 Oryza indica BGIOSGA008619 I
BGIOSGA017263 Oryza indica BGIOSGA017263 I
Bo1g108580 Brassica oleracea Bo1g108580 I
Bo2g032400 Brassica oleracea Bo2g032400 I
Bo5g081310 Brassica oleracea Bo5g081310 I
Bo6g024850 Brassica oleracea Bo6g024850 I
Bostr.19424s0566 Boechera stricta Bostr.19424s0566 I
Bostr.26675s0071 Boechera stricta Bostr.26675s0071 I
Bra006065 Brassica rapa Bra006065 I
Bra009026 Brassica rapa Bra009026 I
Bra018899 Brassica rapa Bra018899 I
Bra024394 Brassica rapa Bra024394 I
Bra028584 Brassica rapa Bra028584 I
BRADI3G48697 Brachypodium distachyon BRADI3G48697 I
BRADI5G14960 Brachypodium distachyon BRADI5G14960 I
Cagra.0917s0035 Capsella grandiflora Cagra.0917s0035 I
Cagra.10399s0013 Capsella grandiflora Cagra.10399s0013 I
Cagra.1085s0008 Capsella grandiflora Cagra.1085s0008 I
Cagra.2093s0009 Capsella grandiflora Cagra.2093s0009 I
Carubv10000560m.g Capsella rubella Carubv10000560m.g I
Carubv10012248m.g Capsella rubella Carubv10012248m.g I
Carubv10015558m.g Capsella rubella Carubv10015558m.g I
Carubv10026295m.g Capsella rubella Carubv10026295m.g I
cassava2127.valid.m1 Manihot esculenta cassava2127.valid.m1 I
cassava26059.m1 Manihot esculenta cassava26059.m1 I
cassava30540.valid.m1 Manihot esculenta cassava30540.valid.m1 I
cassava34052.m1 Manihot esculenta cassava34052.m1 I
cassava45508.m1 Manihot esculenta cassava45508.m1 I
cassava4861.m1 Manihot esculenta cassava4861.m1 I
Ca_06099 Cicer arietinum Ca_06099 I
chr3.CM0602.440.nd Lotus japonicus chr3.CM0602.440.nd I
chr3.LjT37F23.80.nd Lotus japonicus chr3.LjT37F23.80.nd I
Ciclev10013851m.g Citrus clementina Ciclev10013851m.g I
Ciclev10014809m.g Citrus clementina Ciclev10014809m.g I
Ciclev10025339m.g Citrus clementina Ciclev10025339m.g I
Cla000946 Citrullus lanatus Cla000946 I
Cla004613 Citrullus lanatus Cla004613 I
Cla008672 Citrullus lanatus Cla008672 I
Cla019120 Citrullus lanatus Cla019120 I
Eucgr.B01460 Eucalyptus grandis Eucgr.B01460 I
Eucgr.C02333 Eucalyptus grandis Eucgr.C02333 I
Eucgr.I00564 Eucalyptus grandis Eucgr.I00564 I
Eucgr.J00792 Eucalyptus grandis Eucgr.J00792 I
evm.TU.supercontig_233.1 Carica papaya evm.TU.supercontig_233.1 I
evm.TU.supercontig_55.15 Carica papaya evm.TU.supercontig_55.15 I
evm.TU.supercontig_84.82 Carica papaya evm.TU.supercontig_84.82 I
F775_01822 Aegilops tauschii F775_01822 I
F775_02289 Aegilops tauschii F775_02289 I
F775_12085 Aegilops tauschii F775_12085 I
F775_21796 Aegilops tauschii F775_21796 I
F775_52688 Aegilops tauschii F775_52688 I
gene20607-v1.0-hybrid Fragaria vesca gene20607-v1.0-hybrid I
gene20828-v1.0-hybrid Fragaria vesca gene20828-v1.0-hybrid I
gene21524-v1.0-hybrid Fragaria vesca gene21524-v1.0-hybrid I
Gorai.004G099100 Gossypium raimondii Gorai.004G099100 I
Gorai.004G263900 Gossypium raimondii Gorai.004G263900 I
GRMZM2G141638 Zea mays GRMZM2G141638 I
LjT30N18.260.nd Lotus japonicus LjT30N18.260.nd I
LPERR01G35180 Leersia perrieri LPERR01G35180 I
LPERR02G19570 Leersia perrieri LPERR02G19570 I
LPERR04G14400 Leersia perrieri LPERR04G14400 I
LPERR04G23440 Leersia perrieri LPERR04G23440 I
LPERR06G19450 Leersia perrieri LPERR06G19450 I
Lus10002657.g Linum usitatissimum Lus10002657.g I
Lus10012728.g Linum usitatissimum Lus10012728.g I
MDP0000121984 Malus domestica MDP0000121984 I
MDP0000125317 Malus domestica MDP0000125317 I
MDP0000182395 Malus domestica MDP0000182395 I
MDP0000211931 Malus domestica MDP0000211931 I
MDP0000277643 Malus domestica MDP0000277643 I
MDP0000287973 Malus domestica MDP0000287973 I
MDP0000871080 Malus domestica MDP0000871080 I
mgf006398m Mimulus guttatus mgf006398m I
mgf018494m Mimulus guttatus mgf018494m I
mgf019708m Mimulus guttatus mgf019708m I
mgf025366m Mimulus guttatus mgf025366m I
MTR_5g031880 Medicago truncatula MTR_5g031880 I
OB02G31260 Oryza brachyantha OB02G31260 I
OB04G34790 Oryza brachyantha OB04G34790 I
OBART01G40650 Oryza barthii OBART01G40650 I
OBART02G24000 Oryza barthii OBART02G24000 I
OGLUM01G44820 Oryza glumaepatula OGLUM01G44820 I
OGLUM02G24380 Oryza glumaepatula OGLUM02G24380 I
OGLUM04G17960 Oryza glumaepatula OGLUM04G17960 I
OGLUM04G27700 Oryza glumaepatula OGLUM04G27700 I
OGLUM06G24650 Oryza glumaepatula OGLUM06G24650 I
OMERI01G37620 Oryza meridionalis OMERI01G37620 I
OMERI04G14990 Oryza meridionalis OMERI04G14990 I
OMERI04G23230 Oryza meridionalis OMERI04G23230 I
ONIVA01G24550 Oryza nivara ONIVA01G24550 I
ONIVA01G45690 Oryza nivara ONIVA01G45690 I
ONIVA04G26260 Oryza nivara ONIVA04G26260 I
ONIVA06G20030 Oryza nivara ONIVA06G20030 I
OPUNC01G39400 Oryza punctata OPUNC01G39400 I
OPUNC02G21890 Oryza punctata OPUNC02G21890 I
OPUNC04G15650 Oryza punctata OPUNC04G15650 I
OPUNC04G25250 Oryza punctata OPUNC04G25250 I
OPUNC06G21150 Oryza punctata OPUNC06G21150 I
orange1.1g038243m.g Citrus sinensis orange1.1g038243m.g I
ORGLA02G0207800 Oryza glaberrima ORGLA02G0207800 I
ORUFI01G43970 Oryza rufipogon ORUFI01G43970 I
ORUFI04G29440 Oryza rufipogon ORUFI04G29440 I
Pavir.J01327 Panicum virgatum Pavir.J01327 I
PGSC0003DMG400016252 Solanum tuberosum PGSC0003DMG400016252 I
Pm000479 Prunus mume Pm000479 I
Pm002225 Prunus mume Pm002225 I
Pm003724 Prunus mume Pm003724 I
POPTR_0003s20470 Populus trichocarpa POPTR_0003s20470 I
POPTR_0006s18330 Populus trichocarpa POPTR_0006s18330 I
POPTR_0007s14210 Populus trichocarpa POPTR_0007s14210 I
POPTR_0008s07610 Populus trichocarpa POPTR_0008s07610 I
POPTR_0018s09900 Populus trichocarpa POPTR_0018s09900 I
PRUPE_ppa003839mg Prunus persica PRUPE_ppa003839mg I
PRUPE_ppa017502mg Prunus persica PRUPE_ppa017502mg I
PRUPE_ppa019186mg Prunus persica PRUPE_ppa019186mg I
PRUPE_ppa022980mg Prunus persica PRUPE_ppa022980mg I
Sb03g042810 Sorghum bicolor Sb03g042810 I
Sb06g031120 Sorghum bicolor Sb06g031120 I
SELMODRAFT_107288 Selaginella moellendorffii SELMODRAFT_107288 I
SELMODRAFT_1154 Selaginella moellendorffii SELMODRAFT_1154 I
TCM_025114 Theobroma cacao TCM_025114 I
TCM_040576 Theobroma cacao TCM_040576 I
Thhalv10005529m.g Eutrema salsugineum Thhalv10005529m.g I
Thhalv10011353m.g Eutrema salsugineum Thhalv10011353m.g I
Thhalv10020382m.g Eutrema salsugineum Thhalv10020382m.g I
TRAES3BF114600210CFD_g Triticum aestivum TRAES3BF114600210CFD_g I
Traes_2AL_7E3EE8C87 Triticum aestivum Traes_2AL_7E3EE8C87 I
Traes_2BL_8BDCCE9F8 Triticum aestivum Traes_2BL_8BDCCE9F8 I
TRIUR3_12123 Triticum urartu TRIUR3_12123 I
TRIUR3_22176 Triticum urartu TRIUR3_22176 I
TRIUR3_26191 Triticum urartu TRIUR3_26191 I