Cagra.0228s0035 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.0228s0035 T007687_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.768 0.922
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0228s0035.1.p AP2 13 65

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB38017 Xenopus laevis AAB38017 I
AAC25159 Xenopus laevis AAC25159 I
AAC25160 Xenopus laevis AAC25160 I
AAI70116 Xenopus laevis AAI70116 I
Aan_R000637 Calypte anna Aan_R000637 I
Aan_R011678 Calypte anna Aan_R011678 I
ACEP19823 Atta cephalotes ACEP19823 I
ACYPI010036 Acyrthosiphon pisum ACYPI010036 I
Alligator_sinensis_CCG015706.1 Alligator sinensis Alligator_sinensis_CCG015706.1 I
ANCCEY_12825 Ancylostoma ceylanicum ANCCEY_12825 N
ASU_05356 Ascaris suum ASU_05356 I
BGIBMGA013352 Bombyx mori BGIBMGA013352 I
BXY_1713100 Bursaphelenchus xylophilus BXY_1713100 I
Cflo_01240--XP_393740.3_APIME Camponotus floridanus Cflo_01240--XP_393740.3_APIME I
CGOC_0000769801 Cylicostephanus goldi CGOC_0000769801 I
Cmyd_10002384 Chelonia mydas Cmyd_10002384 I
cNFI-A Gallus gallus ENSGALG00000010924 I
CRE26393 Caenorhabditis remanei CRE26393 N
D918_01205 Trichuris suis D918_01205 I
DAPPUDRAFT_244987 Daphnia pulex DAPPUDRAFT_244987 I
DAPPUDRAFT_52430 Daphnia pulex DAPPUDRAFT_52430 I
DME_0000465201 Dracunculus medinensis DME_0000465201 I
ENSACAG00000017087 Anolis carolinensis ENSACAG00000017087 I
ENSAMEG00000005577 Ailuropoda melanoleuca ENSAMEG00000005577 I
ENSAMEG00000011711 Ailuropoda melanoleuca ENSAMEG00000011711 I
ENSAMXG00000003579 Astyanax mexicanus ENSAMXG00000003579 I
ENSAMXG00000015498 Astyanax mexicanus ENSAMXG00000015498 I
ENSAMXG00000017908 Astyanax mexicanus ENSAMXG00000017908 I
ENSAPLG00000003407 Anas platyrhynchos ENSAPLG00000003407 I
ENSCHOG00000006447 Choloepus hoffmanni ENSCHOG00000006447 I
ENSCSAG00000001333 Chlorocebus sabaeus ENSCSAG00000001333 I
ENSDNOG00000002190 Dasypus novemcinctus ENSDNOG00000002190 I
ENSFALG00000012430 Ficedula albicollis ENSFALG00000012430 I
ENSGMOG00000019827 Gadus morhua ENSGMOG00000019827 I
ENSLACG00000004873 Latimeria chalumnae ENSLACG00000004873 I
ENSLAFG00000025943 Loxodonta africana ENSLAFG00000025943 I
ENSLOCG00000001284 Lepisosteus oculatus ENSLOCG00000001284 I
ENSLOCG00000007997 Lepisosteus oculatus ENSLOCG00000007997 I
ENSLOCG00000009919 Lepisosteus oculatus ENSLOCG00000009919 I
ENSMEUG00000015063 Macropus eugenii ENSMEUG00000015063 I
ENSMGAG00000011639 Meleagris gallopavo ENSMGAG00000011639 I
ENSMICG00000005075 Microcebus murinus ENSMICG00000005075 I
ENSMLUG00000024011 Myotis lucifugus ENSMLUG00000024011 I
ENSMPUG00000003850 Mustela putorius furo ENSMPUG00000003850 I
ENSMPUG00000007524 Mustela putorius furo ENSMPUG00000007524 I
ENSOANG00000012488 Ornithorhynchus anatinus ENSOANG00000012488 I
ENSOARG00000008860 Ovis aries ENSOARG00000008860 I
ENSONIG00000004623 Oreochromis niloticus ENSONIG00000004623 I
ENSONIG00000006575 Oreochromis niloticus ENSONIG00000006575 I
ENSONIG00000007717 Oreochromis niloticus ENSONIG00000007717 I
ENSONIG00000018077 Oreochromis niloticus ENSONIG00000018077 I
ENSORLG00000016601 Oryzias latipes ENSORLG00000016601 I
ENSP00000342859-D1 Bos grunniens ENSP00000342859-D1 I
ENSP00000383958 Macaca fascicularis ENSP00000383958 I
ENSPFOG00000000936 Poecilia formosa ENSPFOG00000000936 I
ENSPFOG00000000946 Poecilia formosa ENSPFOG00000000946 I
ENSPFOG00000008414 Poecilia formosa ENSPFOG00000008414 I
ENSPFOG00000013453 Poecilia formosa ENSPFOG00000013453 I
ENSPPYG00000001290 Pongo abelii ENSPPYG00000001290 I
ENSPSIG00000005327 Pelodiscus sinensis ENSPSIG00000005327 I
ENSPSIG00000013911 Pelodiscus sinensis ENSPSIG00000013911 I
ENSSHAG00000009432 Sarcophilus harrisii ENSSHAG00000009432 I
ENSSTOG00000024218 Ictidomys tridecemlineatus ENSSTOG00000024218 I
ENSTNIG00000003187 Tetraodon nigroviridis ENSTNIG00000003187 I
ENSTNIG00000003955 Tetraodon nigroviridis ENSTNIG00000003955 I
ENSXMAG00000000348 Xiphophorus maculatus ENSXMAG00000000348 I
ENSXMAG00000007238 Xiphophorus maculatus ENSXMAG00000007238 I
fgenesh2_pg.scaffold_342000046 Branchiostoma floridae fgenesh2_pg.scaffold_342000046 I
GB44961 Apis mellifera GB44961 I
GD24387 Drosophila simulans FBgn0195728 I
GE14520 Drosophila yakuba FBgn0232122 I
GF21690 Drosophila ananassae FBgn0098690 I
GG16454 Drosophila erecta FBgn0108685 I
GH23980 Drosophila grimshawi FBgn0131437 I
GI14107 Drosophila mojavensis FBgn0136861 I
GJ21334 Drosophila virilis FBgn0208464 I
GK13608 Drosophila willistoni FBgn0215616 I
GL18152 Drosophila persimilis FBgn0155755 I
GM26787 Drosophila sechellia FBgn0181640 I
gw.438.21.1 Branchiostoma floridae gw.438.21.1 I
HelroG141560 Helobdella robusta HelroG141560 I
HHAL002936-PA Halyomorpha halys HHAL002936-PA I
HMEL003745 Heliconius melpomene HMEL003745 I
Hsal_10682--XP_393740.3_APIME Harpegnathos saltator Hsal_10682--XP_393740.3_APIME I
ISCW004440 Ixodes scapularis ISCW004440 I
L596_g9152 Steinernema carpocapsae L596_g9152 I
L798_07165 Zootermopsis nevadensis L798_07165 I
L892_g4417 Steinernema scapterisci L892_g4417 I
LCUP004691 Lucilia cuprina LCUP004691 I
LDEC011938 Leptinotarsa decemlineata LDEC011938 I
LLOJ009491 Lutzomyia longipalpis LLOJ009491 I
LotgiG215606 Lottia gigantea LotgiG215606 I
MDOA004700 Musca domestica MDOA004700 I
MESCA001033 Megaselia scalaris MESCA001033 I
MhA1_Contig410.frz3.gene15 Meloidogyne hapla MhA1_Contig410.frz3.gene15 I
Myotis_brandtii_Nfia_10021409 Myotis brandtii Myotis_brandtii_Nfia_10021409 I
Myotis_brandtii_NFIC_10016328 Myotis brandtii Myotis_brandtii_NFIC_10016328 I
NECAME_05767 Necator americanus NECAME_05767 N
NfI Drosophila melanogaster FBgn0042696 D
NFIA Bos taurus ENSBTAG00000000074 I
NFIA Canis familiaris ENSCAFG00000023117 I
NFIA Callithrix jacchus ENSCJAG00000016165 I
NFIA Cavia porcellus ENSCPOG00000010091 I
nfia Danio rerio ENSDARG00000062420 I
Nfia Dipodomys ordii ENSDORG00000005150 I
NFIA Equus caballus ENSECAG00000015574 I
NFIA Erinaceus europaeus ENSEEUG00000015082 I
NFIA Echinops telfairi ENSETEG00000017068 I
NFIA Felis catus ENSFCAG00000005997 I
NFIA Homo sapiens ENSG00000162599 D
nfia Gasterosteus aculeatus ENSGACG00000003153 I
NFIA Gorilla gorilla ENSGGOG00000027445 I
NFIA Macaca mulatta ENSMMUG00000013840 I
NFIA Monodelphis domestica ENSMODG00000002475 I
Nfia Mus musculus ENSMUSG00000028565 D
NFIA Oryctolagus cuniculus ENSOCUG00000005893 I
nfia Oryzias latipes ENSORLG00000003529 I
NFIA Pan troglodytes ENSPTRG00000000802 I
NFIA Pteropus vampyrus ENSPVAG00000005805 I
Nfia Rattus norvegicus ENSRNOG00000006966 D
NFIA Sorex araneus ENSSARG00000004476 I
NFIA Tupaia belangeri ENSTBEG00000013441 I
NFIA Taeniopygia guttata ENSTGUG00000009745 I
NFIA Tursiops truncatus ENSTTRG00000011222 I
NFIA Vicugna pacos ENSVPAG00000004054 I
nfia Xenopus tropicalis XB-GENE-1010393 I
Nfib Mus musculus ENSMUSG00000008575 D
NFIC Bos taurus ENSBTAG00000008520 I
NFIC Canis familiaris ENSCAFG00000019246 I
NFIC Dasypus novemcinctus ENSDNOG00000042450 I
NFIC Echinops telfairi ENSETEG00000006952 I
NFIC Felis catus ENSFCAG00000000880 I
NFIC Loxodonta africana ENSLAFG00000007134 I
NFIC Myotis lucifugus ENSMLUG00000006476 I
Nfic Mus musculus ENSMUSG00000055053 D
NFIC Otolemur garnettii ENSOGAG00000026321 I
NFIC Procavia capensis ENSPCAG00000002205 I
NFIC Pteropus vampyrus ENSPVAG00000004084 I
Nfic Rattus norvegicus ENSRNOG00000004505 I
nfic Takifugu rubripes ENSTRUG00000005745 I
NFIC Tursiops truncatus ENSTTRG00000009660 I
nfic Xenopus tropicalis XB-GENE-484367 I
NFIX Homo sapiens ENSG00000008441 D
NFIX Macaca mulatta ENSMMUG00000019292 I
NFIX Oryzias latipes ENSORLG00000003734 I
NFIX Takifugu rubripes ENSTRUG00000005030 I
nfix Xenopus tropicalis XB-GENE-992650 I
nfixb Danio rerio ENSDARG00000061836 I
nfixb Tetraodon nigroviridis ENSTNIG00000011170 I
nfixb Takifugu rubripes ENSTRUG00000013602 I
NV15784 Nasonia vitripennis NV15784 I
Pvit_08116 Pogona vitticeps Pvit_08116 I
SINV21439 Solenopsis invicta SINV21439 I
SPAL_0000496300 Strongyloides papillosus SPAL_0000496300 N
SVUK_0000435801 Strongylus vulgaris SVUK_0000435801 I
TC001775 Tribolium castaneum TC001775 I
TCNE_0001032701 Toxocara canis TCNE_0001032701 I
TMUE_s0020006100 Trichuris muris TMUE_s0020006100 I
TTRE_0000653901 Trichuris trichiura TTRE_0000653901 I
yakG029648 Bos grunniens yakG029648 I
YQE_09289 Dendroctonus ponderosae YQE_09289 I