Carubv10022349m.g (Capsella rubella)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Carubv10022349m.g T007910_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.838 1.000
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.838 1.000
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022349m AP2 21 72

Links

Other AP2 family TFs
Other Capsella rubella TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000008512 Ailuropoda melanoleuca ENSAMEG00000008512 I
ENSBTAP00000022184-D1 Bos grunniens ENSBTAP00000022184-D1 I
ENSCSAG00000002403 Chlorocebus sabaeus ENSCSAG00000002403 I
ENSMPUG00000005930 Mustela putorius furo ENSMPUG00000005930 I
ENSOARG00000000770 Ovis aries ENSOARG00000000770 I
ENSP00000337724 Macaca fascicularis ENSP00000337724 I
ENSPANG00000004921 Papio anubis ENSPANG00000004921 I
ENSPPYG00000003989 Pongo abelii ENSPPYG00000003989 I
ENSSHAG00000009268 Sarcophilus harrisii ENSSHAG00000009268 I
ENSSTOG00000027536 Ictidomys tridecemlineatus ENSSTOG00000027536 I
ENSTSYG00000010154 Tarsius syrichta ENSTSYG00000010154 I
ZNF202 Otolemur garnettii ENSOGAG00000026373 I
ZNF202 Bos taurus ENSBTAG00000016684 I
ZNF202 Canis familiaris ENSCAFG00000011509 I
ZNF202 Vicugna pacos ENSVPAG00000004840 I
ZNF202 Tursiops truncatus ENSTTRG00000011530 I
ZNF202 Sus scrofa ENSSSCG00000015145 I
ZNF202 Pan troglodytes ENSPTRG00000004409 I
ZNF202 Dasypus novemcinctus ENSDNOG00000031856 I
ZNF202 Oryctolagus cuniculus ENSOCUG00000014264 I
ZNF202 Choloepus hoffmanni ENSCHOG00000007537 I
ZNF202 Callithrix jacchus ENSCJAG00000007782 I
ZNF202 Monodelphis domestica ENSMODG00000012927 I
ZNF202 Macaca mulatta ENSMMUG00000010646 I
ZNF202 Microcebus murinus ENSMICG00000007659 I
ZNF202 Loxodonta africana ENSLAFG00000008599 I
ZNF202 Gorilla gorilla ENSGGOG00000006891 I
ZNF202 Homo sapiens ENSG00000166261 D
ZNF202 Equus caballus ENSECAG00000024393 I