Eucgr.K02780 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.K02780 T008236_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.754 0.740
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.750 0.840
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.750 0.840
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.741 0.840
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.741 0.840
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.741 0.840
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.736 0.780
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.736 0.780
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.736 0.780
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.736 0.780
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.730 0.780
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.727 0.860
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.725 0.760
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.695 0.800
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.695 0.800
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.695 0.800
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.695 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02780.1 AP2 101 152
Eucgr.K02780.2 AP2 100 151

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

499 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009171 Aedes aegypti AAEL009171 N
AALB007121 Anopheles albimanus AALB007121 N
AARA010071 Anopheles arabiensis AARA010071 N
AATE016879 Anopheles atroparvus AATE016879 N
ACEP24968 Atta cephalotes ACEP24968 N
ACHR006959 Anopheles christyi ACHR006959 N
ACOM034973 Anopheles coluzzii ACOM034973 N
ACUA023615 Anopheles culicifacies ACUA023615 N
ACYPI008922 Acyrthosiphon pisum ACYPI008922 N
ADAC008608 Anopheles darlingi ADAC008608 N
ADIR002890 Anopheles dirus ADIR002890 N
AFAF018426 Anopheles farauti AFAF018426 N
AFUN001494 Anopheles funestus AFUN001494 N
AGAP003726 Anopheles gambiae AGAP003726 N
AMEC020789 Anopheles melas AMEC020789 N
AMEM010172 Anopheles merus AMEM010172 N
AMIN002970 Anopheles minimus AMIN002970 N
AQUA001486 Anopheles quadriannulatus AQUA001486 N
ASTEI00671 Anopheles stephensi ASTEI00671 N
BGIBMGA011510 Bombyx mori BGIBMGA011510 N
CapteG195496 Capitella teleta CapteG195496 N
CG13624 Drosophila melanogaster FBgn0039209 N
CGI_10009013 Crassostrea gigas CGI_10009013 N
CPIJ001396 Culex quinquefasciatus CPIJ001396 N
CpipJ_CPIJ001396 Culex pipiens CpipJ_CPIJ001396 N
DAPPUDRAFT_191081 Daphnia pulex DAPPUDRAFT_191081 N
estExt_fgenesh2_pg.C_4800031 Branchiostoma floridae estExt_fgenesh2_pg.C_4800031 N
fgenesh2_pg.scaffold_447000002 Branchiostoma floridae fgenesh2_pg.scaffold_447000002 N
GB44555 Apis mellifera GB44555 N
GD18285 Drosophila simulans FBgn0189818 N
GG12336 Drosophila erecta FBgn0104626 N
GJ23851 Drosophila virilis FBgn0210946 N
GK14305 Drosophila willistoni FBgn0216311 N
GM23477 Drosophila sechellia FBgn0178344 N
HHAL003878-PA Halyomorpha halys HHAL003878-PA N
HMEL006500 Heliconius melpomene HMEL006500 N
Hsal_14938--XP_397095.2_APIME Harpegnathos saltator Hsal_14938--XP_397095.2_APIME N
ISCW005126 Ixodes scapularis ISCW005126 N
LDEC013255 Leptinotarsa decemlineata LDEC013255 N
LLOJ008588 Lutzomyia longipalpis LLOJ008588 N
LotgiG231402 Lottia gigantea LotgiG231402 N
MCINX002154 Melitaea cinxia MCINX002154 N
NEMVEDRAFT_v1g238168 Nematostella vectensis NEMVEDRAFT_v1g238168 N
NV18305 Nasonia vitripennis NV18305 N
Ocbimv22031434m.g Octopus bimaculoides Ocbimv22031434m.g N
PHUM239100 Pediculus humanus PHUM239100 N
PPAI007084 Phlebotomus papatasi PPAI007084 N
RPRC005655 Rhodnius prolixus RPRC005655 N
Sakowv30041832m.g Saccoglossus kowalevskii Sakowv30041832m.g N
SMAR013202 Strigamia maritima SMAR013202 N
TC000275 Tribolium castaneum TC000275 N
tetur43g00160 Tetranychus urticae tetur43g00160 N
YQE_10681 Dendroctonus ponderosae YQE_10681 N