gene11145-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene11145-v1.0-hybrid T008388_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 1.000
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna11145.1-v1.0-hybrid AP2 32 83

Links

Other AP2 family TFs
Other Fragaria vesca TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29973.m000390 Ricinus communis 29973.m000390 I
30143.m001209 Ricinus communis 30143.m001209 I
AMTR_s00165p00052010 Amborella trichopoda AMTR_s00165p00052010 I
BEL1 Arabidopsis thaliana AT5G41410 I
BEL1 Arabidopsis lyrata fgenesh2_kg.7__3270__AT5G41410.1 I
BGIOSGA011390 Oryza indica BGIOSGA011390 I
BGIOSGA011748 Oryza indica BGIOSGA011748 I
BGIOSGA022158 Oryza indica BGIOSGA022158 I
BGIOSGA035766 Oryza indica BGIOSGA035766 I
BGIOSGA036588 Oryza indica BGIOSGA036588 I
Bo4g142080 Brassica oleracea Bo4g142080 I
Bo5g006800 Brassica oleracea Bo5g006800 I
Bostr.7200s0155 Boechera stricta Bostr.7200s0155 I
Bra025497 Brassica rapa Bra025497 I
BRADI1G74060 Brachypodium distachyon BRADI1G74060 I
BRADI1G76940 Brachypodium distachyon BRADI1G76940 I
BRADI4G00740 Brachypodium distachyon BRADI4G00740 I
Cagra.1873s0010 Capsella grandiflora Cagra.1873s0010 I
Carubv10004359m.g Capsella rubella Carubv10004359m.g I
cassava42275.valid.m1 Manihot esculenta cassava42275.valid.m1 I
Ca_15192 Cicer arietinum Ca_15192 I
Ca_21219 Cicer arietinum Ca_21219 I
Ca_25873 Cicer arietinum Ca_25873 I
Ciclev10011268m.g Citrus clementina Ciclev10011268m.g I
Ciclev10027955m.g Citrus clementina Ciclev10027955m.g I
Cla018449 Citrullus lanatus Cla018449 I
Cucsa.066610 Cucumis sativus Cucsa.066610 I
Cucsa.175830 Cucumis sativus Cucsa.175830 I
Cucsa.185900 Cucumis sativus Cucsa.185900 I
Eucgr.K03046 Eucalyptus grandis Eucgr.K03046 I
F775_19160 Aegilops tauschii F775_19160 I
F775_27987 Aegilops tauschii F775_27987 I
fgenesh1_pg.scaffold_258000001 Physcomitrella patens fgenesh1_pg.scaffold_258000001 I
GLYMA01G25710 Glycine max GLYMA01G25710 I
GLYMA01G43040 Glycine max GLYMA01G43040 I
GLYMA03G17397 Glycine max GLYMA03G17397 I
GLYMA11G02450 Glycine max GLYMA11G02450 I
GLYMA11G18270 Glycine max GLYMA11G18270 I
GLYMA12G10030 Glycine max GLYMA12G10030 I
GLYMA12G31480 Glycine max GLYMA12G31480 I
GLYMA13G38910 Glycine max GLYMA13G38910 I
Gorai.002G255800 Gossypium raimondii Gorai.002G255800 I
Gorai.006G115600 Gossypium raimondii Gorai.006G115600 I
Gorai.011G271200 Gossypium raimondii Gorai.011G271200 I
Gorai.012G108300 Gossypium raimondii Gorai.012G108300 I
GRMZM2G004641 Zea mays GRMZM2G004641 I
GRMZM2G013617 Zea mays GRMZM2G013617 I
GRMZM2G064466 Zea mays GRMZM2G064466 I
GRMZM2G099319 Zea mays GRMZM2G099319 I
GRMZM2G154641 Zea mays GRMZM2G154641 I
GRMZM2G327059 Zea mays GRMZM2G327059 I
GSMUA_Achr11G07620_001 Musa acuminata GSMUA_Achr11G07620_001 I
GSMUA_Achr2G04310_001 Musa acuminata GSMUA_Achr2G04310_001 I
GSMUA_Achr5G07020_001 Musa acuminata GSMUA_Achr5G07020_001 I
LPERR03G01710 Leersia perrieri LPERR03G01710 I
LPERR03G04270 Leersia perrieri LPERR03G04270 I
LSN Vitis vinifera VIT_08s0007g01290 I
Lus10021498.g Linum usitatissimum Lus10021498.g I
Lus10022599.g Linum usitatissimum Lus10022599.g I
Lus10040256.g Linum usitatissimum Lus10040256.g I
MDP0000126587 Malus domestica MDP0000126587 I
MDP0000209399 Malus domestica MDP0000209399 I
MDP0000429775 Malus domestica MDP0000429775 I
mgf003720m Mimulus guttatus mgf003720m I
MLOC_62535 Hordeum vulgare MLOC_62535 I
MLOC_78149 Hordeum vulgare MLOC_78149 I
MTR_4g019450 Medicago truncatula MTR_4g019450 I
MTR_4g051532 Medicago truncatula MTR_4g051532 I
OB01G45990 Oryza brachyantha OB01G45990 I
OB03G11840 Oryza brachyantha OB03G11840 I
OB03G14910 Oryza brachyantha OB03G14910 I
OBART01G37260 Oryza barthii OBART01G37260 I
OBART05G18940 Oryza barthii OBART05G18940 I
OBART06G00550 Oryza barthii OBART06G00550 I
OGLUM03G04700 Oryza glumaepatula OGLUM03G04700 I
OGLUM06G00470 Oryza glumaepatula OGLUM06G00470 I
OLONG_001344 Oryza longistaminata OLONG_001344 I
OLONG_010053 Oryza longistaminata OLONG_010053 I
OMERI03G01810 Oryza meridionalis OMERI03G01810 I
OMERI03G04590 Oryza meridionalis OMERI03G04590 I
ONIVA03G04660 Oryza nivara ONIVA03G04660 I
ONIVA05G19780 Oryza nivara ONIVA05G19780 I
ONIVA06G00550 Oryza nivara ONIVA06G00550 I
OPUNC03G01710 Oryza punctata OPUNC03G01710 I
OPUNC03G04600 Oryza punctata OPUNC03G04600 I
orange1.1g005901m.g Citrus sinensis orange1.1g005901m.g I
orange1.1g006550m.g Citrus sinensis orange1.1g006550m.g I
ORGLA03G0016400 Oryza glaberrima ORGLA03G0016400 I
ORGLA03G0046500 Oryza glaberrima ORGLA03G0046500 I
ORGLA06G0005600 Oryza glaberrima ORGLA06G0005600 I
ORUFI03G04600 Oryza rufipogon ORUFI03G04600 I
ORUFI05G20120 Oryza rufipogon ORUFI05G20120 I
ORUFI06G00570 Oryza rufipogon ORUFI06G00570 I
OS01G0848400 Oryza sativa OS01G0848400 I
OS03G0124000 Oryza sativa OS03G0124000 I
OS03G0165300 Oryza sativa OS03G0165300 I
Pavir.Ia02908 Panicum virgatum Pavir.Ia02908 I
Pavir.Ia04290 Panicum virgatum Pavir.Ia04290 I
Pavir.Ib00072 Panicum virgatum Pavir.Ib00072 I
Pavir.J15357 Panicum virgatum Pavir.J15357 I
PDK_20s1306551g001 Phoenix dactylifera PDK_20s1306551g001 I
PDK_20s1324881g001 Phoenix dactylifera PDK_20s1324881g001 I
PGSC0003DMG400005930 Solanum tuberosum PGSC0003DMG400005930 I
PGSC0003DMG400019635 Solanum tuberosum PGSC0003DMG400019635 I
PGSC0003DMG400024267 Solanum tuberosum PGSC0003DMG400024267 I
PK14089.1 Cannabis sativa PK14089.1 I
Pm001514 Prunus mume Pm001514 I
Pm002609 Prunus mume Pm002609 I
POPTR_0001s22430 Populus trichocarpa POPTR_0001s22430 I
POPTR_0008s06130 Populus trichocarpa POPTR_0008s06130 I
POPTR_0009s02250 Populus trichocarpa POPTR_0009s02250 I
POPTR_0010s20480 Populus trichocarpa POPTR_0010s20480 I
PRUPE_ppa002583mg Prunus persica PRUPE_ppa002583mg I
PRUPE_ppa002604mg Prunus persica PRUPE_ppa002604mg I
SapurV1A.0214s0100 Salix purpurea SapurV1A.0214s0100 I
SapurV1A.1280s0040 Salix purpurea SapurV1A.1280s0040 I
SapurV1A.1412s0040 Salix purpurea SapurV1A.1412s0040 I
Sb01g030620 Sorghum bicolor Sb01g030620 I
Sb01g046170 Sorghum bicolor Sb01g046170 I
Sb10g000800 Sorghum bicolor Sb10g000800 I
Si006303m.g Setaria italica Si006303m.g I
Si034720m.g Setaria italica Si034720m.g I
Si034832m.g Setaria italica Si034832m.g I
Si034965m.g Setaria italica Si034965m.g I
Solyc11g068950.1 Solanum lycopersicum Solyc11g068950.1 I
TCM_021834 Theobroma cacao TCM_021834 I
TCM_042663 Theobroma cacao TCM_042663 I
Thhalv10027690m.g Eutrema salsugineum Thhalv10027690m.g I
Traes_1BL_2DCDCD191 Triticum aestivum Traes_1BL_2DCDCD191 I
Traes_4AL_21D75AE88 Triticum aestivum Traes_4AL_21D75AE88 I
Traes_4AS_4F615C5CC Triticum aestivum Traes_4AS_4F615C5CC I
Traes_4BL_0F02B2343 Triticum aestivum Traes_4BL_0F02B2343 I
Traes_4BL_6D714F995 Triticum aestivum Traes_4BL_6D714F995 I
Traes_4BS_6D714F995 Triticum aestivum Traes_4BS_6D714F995 I
Traes_4DL_4164D3F4C Triticum aestivum Traes_4DL_4164D3F4C I
Traes_4DL_5BB7F31ED Triticum aestivum Traes_4DL_5BB7F31ED I
TRIUR3_16398 Triticum urartu TRIUR3_16398 I