gene27021-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene27021-v1.0-hybrid T008438_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.772 0.900
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.772 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27021.1-v1.0-hybrid AP2 130 181

Links

Other AP2 family TFs
Other Fragaria vesca TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP15315 Atta cephalotes ACEP15315 N 0.000
ASIS006297 Anopheles sinensis ASIS006297 N 0.000
CRE03357 Caenorhabditis remanei CRE03357 N 0.000
DILT_0001312701 Diphyllobothrium latum DILT_0001312701 N 0.000
ECPE_0000273401 Echinostoma caproni ECPE_0000273401 N 0.000
ENSPCAG00000014663 Procavia capensis ENSPCAG00000014663 N 0.000
LOAG_09072 Loa loa LOAG_09072 N 0.000
MDOA004921 Musca domestica MDOA004921 N 0.000
nOo.2.0.1.g06577 Onchocerca ochengi nOo.2.0.1.g06577 N 0.000
pax6.L Xenopus laevis XB-GENE-865046 I 0.000
PEQ_0000587201 Parascaris equorum PEQ_0000587201 N 0.000
PXEA_0001865101 Protopolystoma xenopodis PXEA_0001865101 N 0.000
PXEA_0002437401 Protopolystoma xenopodis PXEA_0002437401 N 0.000
SMU15026520 Schmidtea mediterranea SMU15026520 N 0.000
SPER_0000032601 Spirometra erinaceieuropaei SPER_0000032601 N 0.000
SPER_0001686401 Spirometra erinaceieuropaei SPER_0001686401 N 0.000
SPER_0003607601 Spirometra erinaceieuropaei SPER_0003607601 N 0.000
SSLN_0001114201 Schistocephalus solidus SSLN_0001114201 N 0.000