CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G188300
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.001G188300
T008477_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G188300.1
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.2
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.3
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.4
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.5
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Gorai.001G188300.6
AP2
106
154
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000097901
Angiostrongylus cantonensis
ACAC_0000097901
N
0.000
ACOC_0001046901
Angiostrongylus costaricensis
ACOC_0001046901
N
0.000
ALUE_0001232101
Ascaris lumbricoides
ALUE_0001232101
N
0.000
ANCCAN_17213
Ancylostoma caninum
ANCCAN_17213
N
0.000
ANCCAN_17450
Ancylostoma caninum
ANCCAN_17450
N
0.000
ANCCEY_13601
Ancylostoma ceylanicum
ANCCEY_13601
N
0.000
ASIM_0001667401
Anisakis simplex
ASIM_0001667401
N
0.000
Bm2568
Brugia malayi
Bm2568
N
0.000
BXY_0200600
Bursaphelenchus xylophilus
BXY_0200600
N
0.000
CBG09411
Caenorhabditis briggsae
CBG09411
N
0.000
CRE31028
Caenorhabditis remanei
CRE31028
N
0.000
DICVIV_12287
Dictyocaulus viviparus
DICVIV_12287
N
0.000
dmd-11
Caenorhabditis elegans
WBGene00007930
N
0.000
DME_0001004101
Dracunculus medinensis
DME_0001004101
N
0.000
EEL_0000689801
Elaeophora elaphi
EEL_0000689801
N
0.000
EVEC_0001240701
Enterobius vermicularis
EVEC_0001240701
N
0.000
GPUH_0000001601
Gongylonema pulchrum
GPUH_0000001601
N
0.000
Hba_18606
Heterorhabditis bacteriophora
Hba_18606
N
0.000
HPLM_0000516101
Haemonchus placei
HPLM_0000516101
N
0.000
L596_g1000
Steinernema carpocapsae
L596_g1000
N
0.000
L889_g10736
Steinernema feltiae
L889_g10736
N
0.000
L892_g22878
Steinernema scapterisci
L892_g22878
N
0.000
L893_g12635
Steinernema glaseri
L893_g12635
N
0.000
LOAG_13016
Loa loa
LOAG_13016
N
0.000
nAv.1.0.1.g09210
Acanthocheilonema viteae
nAv.1.0.1.g09210
N
0.000
nOo.2.0.1.g06549
Onchocerca ochengi
nOo.2.0.1.g06549
N
0.000
OESDEN_06978
Oesophagostomum dentatum
OESDEN_06978
N
0.000
OESDEN_10792
Oesophagostomum dentatum
OESDEN_10792
N
0.000
OESDEN_21747
Oesophagostomum dentatum
OESDEN_21747
N
0.000
OFLC_0001267501
Onchocerca flexuosa
OFLC_0001267501
N
0.000
PEQ_0000726101
Parascaris equorum
PEQ_0000726101
N
0.000
PPA09870
Pristionchus pacificus
PPA09870
N
0.000
PTRK_0001597500
Parastrongyloides trichosuri
PTRK_0001597500
N
0.000
RSKR_0001146100
Rhabditophanes kr3021
RSKR_0001146100
N
0.000
scaffold63-EXSNAP2012.11
Pristionchus exspectatus
scaffold63-EXSNAP2012.11
N
0.000
SPAL_0001233000
Strongyloides papillosus
SPAL_0001233000
N
0.000
SVE_0753100
Strongyloides venezuelensis
SVE_0753100
N
0.000
TCLT_0000244001
Thelazia callipaeda
TCLT_0000244001
N
0.000
TELCIR_15174
Teladorsagia circumcincta
TELCIR_15174
N
0.000
WBGene00242644
Onchocerca volvulus
WBGene00242644
N
0.000
WUBG_05396
Wuchereria bancrofti
WUBG_05396
N
0.000