CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G271400
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.009G271400
T008659_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.769
0.898
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.769
0.898
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.769
0.898
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.737
0.816
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.705
0.796
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.680
0.755
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G271400.1
AP2
36
87
CTYKGVRQRTWGKWVAEIREPNRGSRLWLGTFDTALEAAMTYDSAARKLYGS
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
150 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R011740
Calypte anna
Aan_R011740
N
0.000
Brh_R007751
Buceros rhinoceros
Brh_R007751
N
0.000
ENSAMEG00000007825
Ailuropoda melanoleuca
ENSAMEG00000007825
N
0.000
ENSAMXG00000005528
Astyanax mexicanus
ENSAMXG00000005528
N
0.000
ENSAMXG00000010244
Astyanax mexicanus
ENSAMXG00000010244
N
0.000
ENSAMXG00000018187
Astyanax mexicanus
ENSAMXG00000018187
N
0.000
ENSCSAG00000016589
Chlorocebus sabaeus
ENSCSAG00000016589
N
0.000
ENSFALG00000011622
Ficedula albicollis
ENSFALG00000011622
N
0.000
ENSGALG00000014009
Gallus gallus
ENSGALG00000014009
N
0.000
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
0.000
ENSLOCG00000003008
Lepisosteus oculatus
ENSLOCG00000003008
N
0.000
ENSLOCG00000017277
Lepisosteus oculatus
ENSLOCG00000017277
N
0.000
ENSMEUG00000014341
Macropus eugenii
ENSMEUG00000014341
N
0.000
ENSMPUG00000014637
Mustela putorius furo
ENSMPUG00000014637
N
0.000
ENSNLEG00000026803
Nomascus leucogenys
ENSNLEG00000026803
N
0.000
ENSOARG00000013771
Ovis aries
ENSOARG00000013771
N
0.000
ENSORLG00000019825
Oryzias latipes
ENSORLG00000019825
N
0.000
ENSP00000354526-D1
Bos grunniens
ENSP00000354526-D1
N
0.000
ENSP00000357118
Macaca fascicularis
ENSP00000357118
N
0.000
ENSPANG00000010327
Papio anubis
ENSPANG00000010327
N
0.000
ENSPFOG00000009224
Poecilia formosa
ENSPFOG00000009224
N
0.000
ENSPPYG00000017002
Pongo abelii
ENSPPYG00000017002
N
0.000
ENSPSIG00000009472
Pelodiscus sinensis
ENSPSIG00000009472
N
0.000
ENSSHAG00000017557
Sarcophilus harrisii
ENSSHAG00000017557
N
0.000
ENSSTOG00000009978
Ictidomys tridecemlineatus
ENSSTOG00000009978
N
0.000
ENSTSYG00000008001
Tarsius syrichta
ENSTSYG00000008001
N
0.000
ENSXMAG00000014347
Xiphophorus maculatus
ENSXMAG00000014347
N
0.000
Gfo_R016211
Geospiza fortis
Gfo_R016211
N
0.000
L3MBTL3
Sorex araneus
ENSSARG00000012237
N
0.000
L3MBTL3
Gorilla gorilla
ENSGGOG00000000549
N
0.000
L3MBTL3
Sus scrofa
ENSSSCG00000004203
N
0.000
L3MBTL3
Tupaia belangeri
ENSTBEG00000013158
N
0.000
L3MBTL3
Taeniopygia guttata
ENSTGUG00000011709
N
0.000
L3MBTL3
Tursiops truncatus
ENSTTRG00000010125
N
0.000
L3MBTL3
Vicugna pacos
ENSVPAG00000002988
N
0.000
L3MBTL3
Canis familiaris
ENSCAFG00000001115
N
0.000
L3MBTL3
Bos taurus
ENSBTAG00000017393
N
0.000
L3MBTL3
Ochotona princeps
ENSOPRG00000003872
N
0.000
L3MBTL3
Homo sapiens
ENSG00000198945
N
0.000
L3MBTL3
Felis catus
ENSFCAG00000001466
N
0.000
L3MBTL3
Erinaceus europaeus
ENSEEUG00000008805
N
0.000
L3MBTL3
Equus caballus
ENSECAG00000006343
N
0.000
l3mbtl3
Danio rerio
ENSDARG00000025983
N
0.000
L3MBTL3
Meleagris gallopavo
ENSMGAG00000013190
N
0.000
L3MBTL3
Macaca mulatta
ENSMMUG00000021498
N
0.000
L3MBTL3
Monodelphis domestica
ENSMODG00000017623
N
0.000
L3MBTL3
Cavia porcellus
ENSCPOG00000006280
N
0.000
L3MBTL3
Callithrix jacchus
ENSCJAG00000003235
N
0.000
L3MBTL3
Anolis carolinensis
ENSACAG00000014140
N
0.000
L3MBTL3
Oryctolagus cuniculus
ENSOCUG00000016226
N
0.000
L3MBTL3
Otolemur garnettii
ENSOGAG00000001632
N
0.000
L3MBTL3
Pan troglodytes
ENSPTRG00000023858
N
0.000
L3MBTL4
Takifugu rubripes
ENSTRUG00000001294
N
0.000
Pvit_01718
Pogona vitticeps
Pvit_01718
N
0.000
Sakowv30043999m.g
Saccoglossus kowalevskii
Sakowv30043999m.g
N
0.000