Lus10006173.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10006173.g T008753_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF021
M06593_2.00 		Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD
HGDCGGYGRHGRHGRHGRND		 Dap-seq
OMalley et al.(2016)
AT1G71450_col_a 		0.746 0.820
ERF021
M06594_2.00 		Arabidopsis thaliana
NHNNCRCCGHCDH
DHGDCGGYGNNDN		 Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a 		0.746 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10006173 AP2 11 62

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21342_YDR034C Saccharomyces bayanus 21342_YDR034C I
3344_Multiple Saccharomyces mikatae 3344_Multiple I
AACERI_AaceriABL099W Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL099W I
CAGL0K11902g Candida glabrata CAGL0K11902g I
Ecym_5131 Eremothecium cymbalariae Ecym_5131 I
KAFR_0E01250 Kazachstania africana KAFR_0E01250 I
KLLA0_F04213g Kluyveromyces lactis KLLA0_F04213g I
KNAG_0H01260 Kazachstania naganishii KNAG_0H01260 I
Kpol_1061p11 Vanderwaltozyma polyspora Kpol_1061p11 I
LYS14 Saccharomyces cerevisiae YDR034C D
NDAI_0A05750 Naumovozyma dairenensis NDAI_0A05750 I
SAKL0D03586g Lachancea kluyveri SAKL0D03586g I
SKUD_203807 Saccharomyces kudriavzevii SKUD_203807 I
SU7_0595 Saccharomyces arboricola SU7_0595 I
TBLA_0I01890 Tetrapisispora blattae TBLA_0I01890 I
TPHA_0M01040 Tetrapisispora phaffii TPHA_0M01040 I
ZBAI_04585 Zygosaccharomyces bailii ZBAI_04585 I
ZBAI_06624 Zygosaccharomyces bailii ZBAI_06624 I
ZYRO0A03058g Zygosaccharomyces rouxii ZYRO0A03058g I