Lus10028032.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10028032.g T008860_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 0.980
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.940
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.940
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028032 AP2 31 82

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_083620 Aspergillus clavatus CADACLAG00007771 I
AFUA_6G08790 Aspergillus fumigatus CADAFUAG00001570 I
ANIA_01729 Aspergillus nidulans CADANIAG00008374 D
ATEG_06629 Aspergillus terreus CADATEAG00009107 I
CADAFLAG00009914 Aspergillus flavus CADAFLAG00009914 I
CADANGAG00008951 Aspergillus niger CADANGAG00008951 I
EURHEDRAFT_377589 Aspergillus ruber EURHEDRAFT_377589 I
fgenesh1_pm.00118_#_285 Aspergillus carbonarius fgenesh1_pm.00118_#_285 I
NFIA_054440 Neosartorya fischeri CADNFIAG00005184 I
OIDMADRAFT_106725 Oidiodendron maius OIDMADRAFT_106725 I
PCH_Pc12g08840 Penicillium rubens PCH_Pc12g08840 I
PDE_08811 Penicillium oxalicum PDE_08811 I
PDIP_36160 Penicillium digitatum PDIP_36160 I
PEX1_074170 Penicillium expansum PEX1_074170 I
PITC_096370 Penicillium italicum PITC_096370 I
PMAA_073600 Talaromyces marneffei PMAA_073600 I
PMAA_073600 Penicillium marneffei PMAA_073600 I
S40285_06305 Stachybotrys chlorohalonata S40285_06305 I
S40288_04276 Stachybotrys chartarum S40288_04276 I
TRIVIDRAFT_55393 Trichoderma virens TRIVIDRAFT_55393 N
TSTA_094060 Talaromyces stipitatus TSTA_094060 I
U727_0043150051 Penicillium solitum U727_0043150051 I