Pavir.J27101 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.J27101 T009616_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.851 0.925
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.851 0.925
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.752 0.830
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J27101.1.p AP2 115 168

Links

Other AP2 family TFs
Other Panicum virgatum TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AACERI_AaceriAGL091W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL091W I 0.000
AGOS_AGL091W Ashbya gossypii AGOS_AGL091W I 0.000
BN7_6339 Wickerhamomyces ciferrii BN7_6339 N 0.000
KLTH0F07854g Lachancea thermotolerans KLTH0F07854g I 0.000
KLTH0F07854g Kluyveromyces thermotolerans KLTH0F07854g I 0.000
KNAG_0A02550 Kazachstania naganishii KNAG_0A02550 I 0.000
Kpol_529p15 Vanderwaltozyma polyspora Kpol_529p15 N 0.000
Kwal_3122 Kluyveromyces waltii Kwal_3122 I 0.000
LALA0_S12e02300g Lachancea lanzarotensis LALA0_S12e02300g N 0.000
NDAI_0C04840 Naumovozyma dairenensis NDAI_0C04840 I 0.000
TPHA_0L01060 Tetrapisispora phaffii TPHA_0L01060 N 0.000
ZBAI_01680 Zygosaccharomyces bailii ZBAI_01680 N 0.000
ZBAI_09613 Zygosaccharomyces bailii ZBAI_09613 I 0.000
ZYRO0A09350g Zygosaccharomyces rouxii ZYRO0A09350g N 0.000