Thhalv10011778m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10011778m.g T009925_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 1.000
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10011778m AP2 36 87

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000071101 Angiostrongylus cantonensis ACAC_0000071101 N
ACOC_0000490201 Angiostrongylus costaricensis ACOC_0000490201 N
ANCCAN_10824 Ancylostoma caninum ANCCAN_10824 N
ANCCAN_16717 Ancylostoma caninum ANCCAN_16717 N
ANCCEY_12831 Ancylostoma ceylanicum ANCCEY_12831 N
ANCDUO_15208 Ancylostoma duodenale ANCDUO_15208 N
CGOC_0001234401 Cylicostephanus goldi CGOC_0001234401 N
DICVIV_06970 Dictyocaulus viviparus DICVIV_06970 N
HCOI01373400 Haemonchus contortus HCOI01373400 N
HPBE_0001557501 Heligmosomoides bakeri HPBE_0001557501 N
NECAME_08321 Necator americanus NECAME_08321 N
OESDEN_21829 Oesophagostomum dentatum OESDEN_21829 N
TELCIR_13897 Teladorsagia circumcincta TELCIR_13897 N
TELCIR_16337 Teladorsagia circumcincta TELCIR_16337 N
TELCIR_20686 Teladorsagia circumcincta TELCIR_20686 N