CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CaO19.4545
(
Candida albicans
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04383 (KilA-N)
IPR018004
CaO19.4545
T011765_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MBP1
M00003_2.00
Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB
PBM
Badis et al.(2008)
MBP1_4486
0.747
0.597
MBP1
M01514_2.00
Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN
PBM
Zhu et al.(2009)
Mbp1
0.747
0.597
MBP1
M07434_2.00
Saccharomyces cerevisiae
NDCGCGH
DCGCGHN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1
0.747
0.597
MBP1
M08472_2.00
Saccharomyces cerevisiae
NDCGCGH
DCGCGHN
Misc
DeBoer et al.(2011)
YDL056W_500
0.747
0.597
NCU07587
M01654_2.00
Neurospora crassa
NNNDCRCGN
NCGYGHNNN
PBM
Weirauch et al.(2014)
pTH9687
0.730
0.545
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00
PBM CONSTRUCTS
NNACGCGW
WCGCGTNN
PBM
Lambert et al.(2019)
pTH9838
0.721
0.519
NCU07246
M01653_2.00
Neurospora crassa
NDCRCGN
NCGYGHN
PBM
Weirauch et al.(2014)
pTH8957
0.713
0.571
ANIA_03154
M01650_2.00
Aspergillus nidulans
NNACGCG
CGCGTNN
PBM
Weirauch et al.(2014)
pTH8232
0.696
0.390
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAK93805
APSES
1
80
MMNESSIMRRCKDDWVNATQILKCCNFPKAKRTKILEKGVQQGLHEKVQGGFGRFQGTWIPLEDARKLAKTYGVTEELAP
Links
Other
APSES
family TFs
Other
Candida albicans
TFs
433 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_40161
Phytophthora capsici
estExt_fgenesh1_kg.C_40161
N
F443_04563
Phytophthora parasitica
F443_04563
N
fgenesh_scip_prom.28083.954
Phytophthora lateralis
fgenesh_scip_prom.28083.954
N
fgenesh_scip_prom.46568.3285
Phytophthora kernoviae
fgenesh_scip_prom.46568.3285
N
HpaG807298
Hyaloperonospora arabidopsidis
HpaG807298
N
maker-pag1_scaffold_589-snap-gene-0.14
Pythium aphanidermatum
maker-pag1_scaffold_589-snap-gene-0.14
N
maker-par_contig_1670-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_1670-fgenesh-gene-0.2
N
maker-pve_contig_414-snap-gene-0.15
Pythium vexans
maker-pve_contig_414-snap-gene-0.15
N
Phyra84384
Phytophthora ramorum
Phyra84384
N
Physo138557
Phytophthora sojae
Physo138557
N
PYU1_G006571
Pythium ultimum
PYU1_G006571
N