CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

TVAG_242410 *(Trichomonas vaginalis)* APSES
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF04383 (KilA-N)	IPR018004	TVAG_242410	T013027_2.00	EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
XBP1 M00005_2.00	Saccharomyces cerevisiae	NCTCGARN	NYTCGAGN	PBM Badis et al.(2008) XBP1_4495	0.671	0.039
XBP1 M01515_2.00	Saccharomyces cerevisiae	NNYTCGR	YCGARNN	PBM Zhu et al.(2009) Xbp1	0.671	0.039
XBP1 M07436_2.00	Saccharomyces cerevisiae	YTCGARN	NYTCGAR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0414.1	0.671	0.039
XBP1 M08474_2.00	Saccharomyces cerevisiae	VNCTCGARGMNR	YNKCYTCGAGNB	Misc DeBoer et al.(2011) YIL101C_2039	0.671	0.039
XBP1 M09764_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$XBP1_03	0.671	0.039
XBP1 M09765_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$XBP1_Q2	0.671	0.039
For this family, TFs with SR scores > 0.650* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
TVAG_242410	APSES	4	59	TGKKPRVEIPYENRQNLPNGLRGYYVHRLLVNAVAMWASPRYACYIFMMLDEIHRQ

Links
Other APSES family TFs
Other *Trichomonas vaginalis* TFs