CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

e_gw1.5.76.1 *(Nectria haematococca)* APSES
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF04383 (KilA-N)	IPR018004	e_gw1.5.76.1	T013902_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
e_gw1.5.76.1 M01652_2.00	Nectria haematococca	NNVTGCABNN	NNVTGCABNN	PBM Weirauch et al.(2014) pTH9267	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HCAG_07413 M01651_2.00	Histoplasma capsulatum	NNNHRYDNNN	NNNHRYDNNN	PBM Weirauch et al.(2014) pTH9346	0.851	0.915
stuA M01649_2.00	Aspergillus nidulans	NNTGCAKNNN	NNNMTGCANN	PBM Weirauch et al.(2014) pTH9236	0.724	0.866
stuA M09761_2.00	Aspergillus nidulans	DBDCGCGWWB	VWWCGCGHVH	Transfac Matys et al.(2006) F$STUAP_01	0.724	0.866
For this family, TFs with SR scores > 0.650* will likely have a similar motif*

Experimental Constructs

Motif ID	Domain	From	To	Sequence
M01652_2.00	APSES	50	136	FQVEARGICVARREDNHMINGTKLLNVAGMTRGRRDGILKSEKVRHVVKIGPMHLKGVWIPYDRALDFANKEKITELLYPLFVHNIG

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
e_gw1.5.76.1	APSES	123	209	FQVEARGICVARREDNHMINGTKLLNVAGMTRGRRDGILKSEKVRHVVKIGPMHLKGVWIPYDRALDFANKEKITELLYPLFVHNIG

Links
Other APSES family TFs
Other *Nectria haematococca* TFs