6438_YER111C (Saccharomyces mikatae)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 6438_YER111C T013960_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SWI4
M00004_2.00 		Saccharomyces cerevisiae
RACGCGWW
WWCGCGTY		 PBM
Badis et al.(2008)
SWI4_4482 		0.867 1.000
SWI4
M07435_2.00 		Saccharomyces cerevisiae
DCGCGAAW
WTTCGCGH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0401.1 		0.867 1.000
SWI4
M08473_2.00 		Saccharomyces cerevisiae
DCGCGAAW
WTTCGCGH		 Misc
DeBoer et al.(2011)
YER111C_584 		0.867 1.000
SWI4
M09762_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$SWI4_Q6_01 		0.867 1.000
SWI4
M09763_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$SWI4_Q6 		0.867 1.000
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
6438_YER111C APSES 52 141

Links

Other APSES family TFs
Other Saccharomyces mikatae TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
6569_YER111C Saccharomyces paradoxus 6569_YER111C I 0.880
6809_YER111C Saccharomyces bayanus 6809_YER111C I 0.851
CAGL0A04565g Candida glabrata CAGL0A04565g I 0.675
Ecym_7145 Eremothecium cymbalariae Ecym_7145 N 0.657
KAFR_0K01930 Kazachstania africana KAFR_0K01930 I 0.678
KAFR_0L01860 Kazachstania africana KAFR_0L01860 N 0.662
KLTH0C06270g Lachancea thermotolerans KLTH0C06270g N 0.663
KLTH0C06270g Kluyveromyces thermotolerans KLTH0C06270g N 0.663
Kpol_1018p105 Vanderwaltozyma polyspora Kpol_1018p105 I 0.654
Kpol_1045p30 Vanderwaltozyma polyspora Kpol_1045p30 I 0.675
Kwal_10756 Kluyveromyces waltii Kwal_10756 I 0.671
LALA0_S01e06304g Lachancea lanzarotensis LALA0_S01e06304g I 0.664
SAKL0F12870g Lachancea kluyveri SAKL0F12870g I 0.724
SU7_0916 Saccharomyces arboricola SU7_0916 I 0.806
SWI4 Saccharomyces cerevisiae YER111C D 0.867
TBLA_0D00490 Tetrapisispora blattae TBLA_0D00490 I 0.716
TDEL_0C02690 Torulaspora delbrueckii TDEL_0C02690 I 0.688
ZBAI_00748 Zygosaccharomyces bailii ZBAI_00748 I 0.698
ZBAI_06045 Zygosaccharomyces bailii ZBAI_06045 I 0.698
ZYRO0B03740g Zygosaccharomyces rouxii ZYRO0B03740g I 0.697