ARID3A (Loxodonta africana)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSLAFG00000005629 T014586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.785 1.000
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.785 1.000
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.785 1.000
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.785 1.000
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.785 1.000
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.785 0.988
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.720 0.779
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.706 0.837
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.706 0.837
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.706 0.837
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.706 0.837
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.695 0.895
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.694 0.488
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.683 0.686
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.554 0.419
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.521 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000004725 ARID/BRIGHT 82 168

Links

Other ARID/BRIGHT family TFs
Other Loxodonta africana TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003816 Calypte anna Aan_R003816 I
ACHR008952 Anopheles christyi ACHR008952 I
AEPI008594 Anopheles epiroticus AEPI008594 I
Alligator_sinensis_CCG011289.1 Alligator sinensis Alligator_sinensis_CCG011289.1 I
Alligator_sinensis_CCG016979.1 Alligator sinensis Alligator_sinensis_CCG016979.1 I
BGIBMGA001129 Bombyx mori BGIBMGA001129 I
CPIJ013490 Culex quinquefasciatus CPIJ013490 I
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I
D917_06432 Trichinella nativa D917_06432 I
D918_02241 Trichuris suis D918_02241 I
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I
egl-44 Caenorhabditis elegans WBGene00001208 I
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I
ENSCJAG00000018829 Callithrix jacchus ENSCJAG00000018829 I
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I
ENSGMOG00000007916 Gadus morhua ENSGMOG00000007916 I
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I
ENSMEUG00000006301 Macropus eugenii ENSMEUG00000006301 N
ENSNLEG00000002771 Nomascus leucogenys ENSNLEG00000002771 I
ENSOARG00000012126 Ovis aries ENSOARG00000012126 I
ENSOCUG00000015389 Oryctolagus cuniculus ENSOCUG00000015389 I
ENSONIG00000005991 Oreochromis niloticus ENSONIG00000005991 N
ENSONIG00000011013 Oreochromis niloticus ENSONIG00000011013 I
ENSP00000352926 Macaca fascicularis ENSP00000352926 N
ENSPFOG00000003170 Poecilia formosa ENSPFOG00000003170 I
ENSPFOG00000009547 Poecilia formosa ENSPFOG00000009547 I
ENSPFOG00000011847 Poecilia formosa ENSPFOG00000011847 N
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I
ENSXMAG00000015423 Xiphophorus maculatus ENSXMAG00000015423 I
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I
ISCW001055 Ixodes scapularis ISCW001055 N
LotgiG210691 Lottia gigantea LotgiG210691 I
Myotis_brandtii_TEAD4_10028679 Myotis brandtii Myotis_brandtii_TEAD4_10028679 I
NEMVEDRAFT_v1g86806 Nematostella vectensis NEMVEDRAFT_v1g86806 I
Ogr18322 Ophisaurus gracilis Ogr18322 I
PPAI001408 Phlebotomus papatasi PPAI001408 I
Pvit_05988 Pogona vitticeps Pvit_05988 I
SMAR011013 Strigamia maritima SMAR011013 I
Tead1 Dipodomys ordii ENSDORG00000013529 N
TEAD1 Choloepus hoffmanni ENSCHOG00000001087 N
TEAD1 Vicugna pacos ENSVPAG00000005288 N
TEAD1 Microcebus murinus ENSMICG00000007178 I
tead1a Takifugu rubripes ENSTRUG00000005940 I
tead1a Danio rerio ENSDARG00000028159 I
tead1b Danio rerio ENSDARG00000059483 I
tead1b Gasterosteus aculeatus ENSGACG00000015715 I
tead1b Tetraodon nigroviridis ENSTNIG00000009360 N
TEAD2 Microcebus murinus ENSMICG00000009284 I
TEAD2 Tursiops truncatus ENSTTRG00000005361 I
TEAD2 Pteropus vampyrus ENSPVAG00000010945 I
TEAD3 Gorilla gorilla ENSGGOG00000001847 I
TEAD3 Taeniopygia guttata ENSTGUG00000001691 I
TEAD3 Loxodonta africana ENSLAFG00000014818 I
TEAD3 Microcebus murinus ENSMICG00000000029 I
TEAD3 Canis familiaris ENSCAFG00000001326 I
TEAD3 Tursiops truncatus ENSTTRG00000009434 I
TEAD3 Homo sapiens ENSG00000007866 D
TEAD3 Felis catus ENSFCAG00000012905 I
TEAD3 Otolemur garnettii ENSOGAG00000002943 I
TEAD3 Equus caballus ENSECAG00000015056 I
Tead3 Dipodomys ordii ENSDORG00000010798 I
tead3a Takifugu rubripes ENSTRUG00000011546 I
tead4 Xenopus tropicalis XB-GENE-956369 I
TEAD4 Ochotona princeps ENSOPRG00000015460 N
TEAD4 Sus scrofa ENSSSCG00000000736 I
TEAD4 Callithrix jacchus ENSCJAG00000023239 I
TEAD4 Cavia porcellus ENSCPOG00000020720 I
TEAD4 Felis catus ENSFCAG00000000150 N
TEAD4 Homo sapiens ENSG00000197905 D
TEAD4 Loxodonta africana ENSLAFG00000006998 I
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I
TEAD4 Microcebus murinus ENSMICG00000000108 I
TEAD4 Myotis lucifugus ENSMLUG00000005310 N
Tead4 Mus musculus ENSMUSG00000030353 D
TEAD4 Otolemur garnettii ENSOGAG00000005199 I
TEAD4 Oryzias latipes ENSORLG00000002553 I
TEAD4 Pan troglodytes ENSPTRG00000004538 N
Tead4 Rattus norvegicus ENSRNOG00000005608 I
TEAD4 Tursiops truncatus ENSTTRG00000007774 N
tead4.S Xenopus laevis XB-GENE-956372 N
TsM_000210300 Taenia solium TsM_000210300 I